details.jsp 8.3 KB
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<!DOCTYPE html>

<%@include file="/WEB-INF/jsp/init.jsp"%>

<html>
<head>
<title><spring:message code="accession.page.profile.title" arguments="${accession.accessionName}" argumentSeparator="|" /></title>
</head>
<body>
	<h1>
		<c:out value="${accession.accessionName}" />
		<small><c:out value="${accession.instituteCode}" /></small>
	</h1>
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	<div class="page-header acn">
		<div class="sel ${selection.containsId(accession.id) ? 'picked' : ''}" x-aid="${accession.id}">
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			<a class="add" href="<c:url value="/sel/add/${accession.id}" />"><spring:message code="selection.add" arguments="${accession.accessionName}" /></a> <a class="remove" href="<c:url value="/sel/remove/${accession.id}" />"><spring:message code="selection.remove"
					arguments="${accession.accessionName}" /></a>
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		</div>
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	</div>
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	<c:if test="${accession.inTrust eq true}">
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		<div class="alert alert-info">
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			<spring:message code="accession.inTrust.true" />
		</div>
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	</c:if>
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	<c:if test="${accession.inSvalbard eq true}">
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		<div class="alert alert-info">
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			<spring:message code="accession.inSvalbard.true" />
		</div>
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	</c:if>
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	<c:if test="${accession.mlsStatus eq true}">
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		<div class="alert alert-info">
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			<spring:message code="accession.mlsStatus.true" />
		</div>
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	</c:if>
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	<c:if test="${not accession.availability}">
		<div class="alert alert-warning">
			<spring:message code="accession.not-available-for-distribution" />
		</div>
	</c:if>
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	<table>
		<tbody>
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			<tr>
				<td><spring:message code="accession.holdingInstitute" /></td>
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				<td><a href="<c:url value="/wiews/${accession.instituteCode.toLowerCase()}" />"> <c:out value="${accession.institute.fullName}" />
				</a></td>
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			</tr>
			<tr>
				<td><spring:message code="accession.holdingCountry" /></td>
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				<td><a href="<c:url value="/geo/${accession.institute.country.code3.toLowerCase()}" />"><c:out value="${accession.institute.country.getName(pageContext.response.locale)}" /></a></td>
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			</tr>
			<tr>
				<td><spring:message code="accession.accessionName" /></td>
				<td><c:out value="${accession.accessionName}" /></td>
			</tr>
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			<c:if test="${crops ne null}">
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				<tr>
					<td><spring:message code="accession.crop" /></td>
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					<td><c:forEach items="${crops}" var="crop">
							<a href="<c:url value="/c/${crop.shortName}" />"><c:out value="${crop.getName(pageContext.response.locale)}" /></a>
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						</c:forEach></td>
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				</tr>
			</c:if>
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			<c:if test="${accession.countryOfOrigin ne null}">
				<tr>
					<td><spring:message code="accession.origin" /></td>
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					<td><img src="${cdnFlagsUrl}/${accession.origin.toUpperCase()}.png" /> <a href="<c:url value="/geo/${accession.origin.toLowerCase()}" />"> <c:out value="${accession.countryOfOrigin.getName(pageContext.response.locale)}" />
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					</a></td>
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				</tr>
			</c:if>
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			<tr>
				<td><spring:message code="taxonomy.genus" /></td>
				<td><c:out value="${accession.taxonomy.genus}" /></td>
			</tr>
			<tr>
				<td><spring:message code="taxonomy.species" /></td>
				<td><c:out value="${accession.taxonomy.species}" /></td>
			</tr>
			<tr>
				<td><spring:message code="taxonomy.taxonName" /></td>
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				<td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.taxonName}" /></a> <br /> <a
					href="<c:url value="/wiews/${accession.institute.code.toLowerCase()}/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><spring:message code="accession.taxonomy-at-institute" arguments="${accession.taxonomy.taxonName}|||${accession.institute.code}" argumentSeparator="|||" /></a></td>
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			</tr>
			<tr>
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				<td><spring:message code="accession.otherNames" /></td>
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				<td><c:out value="${accessionNames.accNames}" /><br /> <c:out value="${accessionNames.otherIds}" /></td>
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			</tr>
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			<tr>
				<td><spring:message code="accession.sampleStatus" /></td>
				<td><spring:message code="accession.sampleStatus.${accession.sampleStatus}" /></td>
			</tr>
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			<c:if test="${accessionExchange ne null}">
				<tr>
					<td><spring:message code="accession.donor.institute" /></td>
					<td>${accessionExchange.donorInstitute}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.donor.accessionNumber" /></td>
					<td>${accessionExchange.accNumbDonor}</td>
				</tr>
			</c:if>

			<c:if test="${accessionCollect ne null}">
				<tr>
					<td><spring:message code="accession.collecting.date" /></td>
					<td>${accessionCollect.collectDate}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.collecting.number" /></td>
					<td>${accessionCollect.collectorsNumb}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.collecting.institute" /></td>
					<td>${accessionCollect.collectingInstitute}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.collecting.site" /></td>
					<td>${accessionCollect.collectSite}</td>
				</tr>
			</c:if>

			<c:if test="${accessionBreeding ne null}">
				<tr>
					<td><spring:message code="accession.breederCode" /></td>
					<td>${accessionBreeding.breederCode}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.pedigree" /></td>
					<td>${accessionBreeding.pedigree}</td>
				</tr>
			</c:if>


			<c:if test="${accessionEnvironment ne null}">
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				<c:if test="${accessionEnvironment.latitude ne null}">
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				<tr>
					<td><spring:message code="accession.geolocation" /></td>
					<td>${accessionEnvironment.latitude}, ${accessionEnvironment.longitude}</td>
				</tr>
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				</c:if>
				<c:if test="${accessionEnvironment.altitude ne null}">
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				<tr>
					<td><spring:message code="accession.altitude" /></td>
					<td>${accessionEnvironment.altitude}<span class="uom">m</span></td>
				</tr>
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				</c:if>
				<c:if test="${accessionEnvironment.latitude ne null}">
				<tr>
					<td colspan="2">
						<div id="accessionMap" style="width: 100%; height: 300px">Loading Google Maps...</div>
					</td>
				</tr>
				</c:if>
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			</c:if>

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			<c:if test="${accession.svalbardData ne null}">
				<tr>
					<td colspan="2">
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						<h4><spring:message code="accession.svalbard-data" /></h4>
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					</td>
				</tr>
				<tr>
					<td>Reported taxonomy</td>
					<td>${accession.svalbardData.taxonomy}</td>
				</tr>

				<tr>
					<td>Deposit date</td>
					<td>${accession.svalbardData.depositDate}</td>
				</tr>
				<tr>
					<td>Box number</td>
					<td>${accession.svalbardData.boxNumber}</td>
				</tr>
				<tr>
					<td>Quantity</td>
					<td>${accession.svalbardData.quantity}</td>
				</tr>

			</c:if>


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		</tbody>
	</table>
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	<c:if test="${methods.size() gt 0}">
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		<h4>
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			<spring:message code="accession.methods" />
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		</h4>
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		<table>
			<tbody>
				<c:forEach items="${methods}" var="method" varStatus="status">
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					<tr class="targeted" id="method${method.id}">
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						<td><c:out value="${method.parameter.title}" /></td>
						<td><c:forEach items="${methodValues[method.id]}" var="val">
								<div>
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									<c:out value="${method.decode(val.value)}" />
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									<span class="uom"><c:out value="${method.unit}" /></span> <sup><a href="#metadata-${val.experimentId}"><c:out value="${val.experimentId}" /></a></sup>
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								</div>
							</c:forEach></td>
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						<td class="notimportant"><c:out value="${method.method}" /></td>
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					</tr>
				</c:forEach>
			</tbody>
		</table>
	</c:if>

	<c:if test="${metadatas.size() gt 0}">
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		<h4>
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			<spring:message code="accession.metadatas" />
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		</h4>
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		<ul class="funny-list">
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			<c:forEach items="${metadatas}" var="metadata" varStatus="status">
				<li class="clearfix targeted ${status.count % 2 == 0 ? 'even' : 'odd'}" id="metadata-${metadata.id}">
					<div class="show pull-left">
						<sup><c:out value="${metadata.id}" /></sup> <a href="<c:url value="/data/view/${metadata.id}" />"><c:out value="${metadata.title}" /></a>
					</div>
					<div class="pull-right">
						<c:out value="${metadata.institute}" />
					</div>
					<div class="pull-right">
						<c:out value="${metadata.description}" />
					</div>
				</li>
			</c:forEach>
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		</ul>
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	</c:if>

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<c:if test="${accessionEnvironment ne null and accessionEnvironment.latitude ne null}">
	<script type="text/javascript">
		jQuery(document).ready(function() {
			var accessionMap=GoogleMaps.map($("#accessionMap"), { center: new GoogleMaps.LatLng(${accessionEnvironment.latitude}, ${accessionEnvironment.longitude}), markerTitle: "<spring:escapeBody javaScriptEscape="true">${accession.accessionName}, ${accession.instituteCode}</spring:escapeBody>" });
		});
	</script>
</c:if>
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</body>
</html>