Skip to content

GitLab

Genesys Backend
Genesys Backend
Switch branch/tag
Find file Normal viewHistoryPermalink
details.jsp 9.15 KB
Newer Older
Matija Obreza's avatar
Accession details  
Matija Obreza committed
1 2 3 4 5 6 7 8 9 10 11 12 13 
<!DOCTYPE html>

<%@include file="/WEB-INF/jsp/init.jsp"%>

<html>
<head>
<title><spring:message code="accession.page.profile.title" arguments="${accession.accessionName}" argumentSeparator="|" /></title>
</head>
<body>
	<h1>
		<c:out value="${accession.accessionName}" />
		<small><c:out value="${accession.instituteCode}" /></small>
	</h1>
Matija Obreza's avatar
Updates  
Matija Obreza committed
14
Matija Obreza's avatar
Ajaxify accession selection  
Matija Obreza committed
15 16 
	<div class="page-header acn">
		<div class="sel ${selection.containsId(accession.id) ? 'picked' : ''}" x-aid="${accession.id}">
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
17 18 
			<a class="add" href="<c:url value="/sel/add/${accession.id}" />"><spring:message code="selection.add" arguments="${accession.accessionName}" /></a> <a class="remove" href="<c:url value="/sel/remove/${accession.id}" />"><spring:message code="selection.remove"
					arguments="${accession.accessionName}" /></a>
Matija Obreza's avatar
Ajaxify accession selection  
Matija Obreza committed
19 
		</div>
Matija Obreza's avatar
Accession selection  
Matija Obreza committed
20 
	</div>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
21
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
22 
	<c:if test="${accession.inTrust eq true}">
Matija Obreza's avatar
Changes for bootstrap3  
Matija Obreza committed
23 
		<div class="alert alert-info">
Matija Obreza's avatar
Updates  
Matija Obreza committed
24 25 
			<spring:message code="accession.inTrust.true" />
		</div>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
26 
	</c:if>
Matija Obreza's avatar
Updates  
Matija Obreza committed
27
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
28 
	<c:if test="${accession.inSvalbard eq true}">
Matija Obreza's avatar
Changes for bootstrap3  
Matija Obreza committed
29 
		<div class="alert alert-info">
Matija Obreza's avatar
Updates  
Matija Obreza committed
30 31 
			<spring:message code="accession.inSvalbard.true" />
		</div>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
32 
	</c:if>
Matija Obreza's avatar
Updates  
Matija Obreza committed
33
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
34 
	<c:if test="${accession.mlsStatus eq true}">
Matija Obreza's avatar
Changes for bootstrap3  
Matija Obreza committed
35 
		<div class="alert alert-info">
Matija Obreza's avatar
Updates  
Matija Obreza committed
36 37 
			<spring:message code="accession.mlsStatus.true" />
		</div>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
38 
	</c:if>
Matija Obreza's avatar
Addressed issue #5  
Matija Obreza committed
39
Matija Obreza's avatar
Germplasm requests are checked with ITPGRFA's PID server  
Matija Obreza committed
40 
	<c:if test="${accession.availability eq false}">
Matija Obreza's avatar
Addressed issue #5  
Matija Obreza committed
41 42 43 44 
		<div class="alert alert-warning">
			<spring:message code="accession.not-available-for-distribution" />
		</div>
	</c:if>
Matija Obreza's avatar
Accession availability message  
Matija Obreza committed
45 46 47 48 49 50 
	
	<c:if test="${accession.availability eq true}">
		<div class="alert alert-info">
			<spring:message code="accession.available-for-distribution" />
		</div>
	</c:if>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
51
Matija Obreza's avatar
Accession details  
Matija Obreza committed
52 53 
	<table>
		<tbody>
Matija Obreza's avatar
Updates  
Matija Obreza committed
54 55
Matija Obreza's avatar
Accession details  
Matija Obreza committed
56 57 
			<tr>
				<td><spring:message code="accession.holdingInstitute" /></td>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
58 59 
				<td><a href="<c:url value="/wiews/${accession.instituteCode.toLowerCase()}" />"> <c:out value="${accession.institute.fullName}" />
				</a></td>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
60 61 62 
			</tr>
			<tr>
				<td><spring:message code="accession.holdingCountry" /></td>
Matija Obreza's avatar
Localized country names  
Matija Obreza committed
63 
				<td><a href="<c:url value="/geo/${accession.institute.country.code3.toLowerCase()}" />"><c:out value="${accession.institute.country.getName(pageContext.response.locale)}" /></a></td>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
64 65 66 67 68 
			</tr>
			<tr>
				<td><spring:message code="accession.accessionName" /></td>
				<td><c:out value="${accession.accessionName}" /></td>
			</tr>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
69
Matija Obreza's avatar
Fixed typo  
Matija Obreza committed
70 
			<c:if test="${crops ne null}">
Matija Obreza's avatar
Display accession's crop in details, removed hyperlinks in lists  
Matija Obreza committed
71 72 
				<tr>
					<td><spring:message code="accession.crop" /></td>
Matija Obreza's avatar
Removed crop.language, translations for all fields are stored in field  
Matija Obreza committed
73 74 
					<td><c:forEach items="${crops}" var="crop">
							<a href="<c:url value="/c/${crop.shortName}" />"><c:out value="${crop.getName(pageContext.response.locale)}" /></a>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
75 
						</c:forEach></td>
Matija Obreza's avatar
Display accession's crop in details, removed hyperlinks in lists  
Matija Obreza committed
76 77 
				</tr>
			</c:if>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
78
Matija Obreza's avatar
More info on accessions  
Matija Obreza committed
79 80 81 
			<c:if test="${accession.countryOfOrigin ne null}">
				<tr>
					<td><spring:message code="accession.origin" /></td>
Matija Obreza's avatar
CDN configuration (flags)  
Matija Obreza committed
82 
					<td><img src="${cdnFlagsUrl}/${accession.origin.toUpperCase()}.png" /> <a href="<c:url value="/geo/${accession.origin.toLowerCase()}" />"> <c:out value="${accession.countryOfOrigin.getName(pageContext.response.locale)}" />
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
83 
					</a></td>
Matija Obreza's avatar
More info on accessions  
Matija Obreza committed
84 85 
				</tr>
			</c:if>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
86
Matija Obreza's avatar
Accession details  
Matija Obreza committed
87 88 89 90 91 92 93 94 95 96 
			<tr>
				<td><spring:message code="taxonomy.genus" /></td>
				<td><c:out value="${accession.taxonomy.genus}" /></td>
			</tr>
			<tr>
				<td><spring:message code="taxonomy.species" /></td>
				<td><c:out value="${accession.taxonomy.species}" /></td>
			</tr>
			<tr>
				<td><spring:message code="taxonomy.taxonName" /></td>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
97 98 
				<td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.taxonName}" /></a> <br /> <a
					href="<c:url value="/wiews/${accession.institute.code.toLowerCase()}/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><spring:message code="accession.taxonomy-at-institute" arguments="${accession.taxonomy.taxonName}|||${accession.institute.code}" argumentSeparator="|||" /></a></td>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
99 
			</tr>
Matija Obreza's avatar
Germplasm requests are checked with ITPGRFA's PID server  
Matija Obreza committed
100 101 102 103 104 105 106 

			<tr>
				<td><spring:message code="accession.availability" /></td>
				<td><spring:message code="accession.availability.${accession.availability}" /></td>
			</tr>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
107 
			<tr>
Matija Obreza's avatar
More info on accessions  
Matija Obreza committed
108 
				<td><spring:message code="accession.otherNames" /></td>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
109 
				<td><c:out value="${accessionNames.accNames}" /><br /> <c:out value="${accessionNames.otherIds}" /></td>
Matija Obreza's avatar
More info on accessions  
Matija Obreza committed
110 
			</tr>
Matija Obreza's avatar
Accession sampstat  
Matija Obreza committed
111 112 113 114 115 
			
			<tr>
				<td><spring:message code="accession.sampleStatus" /></td>
				<td><spring:message code="accession.sampleStatus.${accession.sampleStatus}" /></td>
			</tr>
Matija Obreza's avatar
Updates  
Matija Obreza committed
116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 


			<c:if test="${accessionExchange ne null}">
				<tr>
					<td><spring:message code="accession.donor.institute" /></td>
					<td>${accessionExchange.donorInstitute}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.donor.accessionNumber" /></td>
					<td>${accessionExchange.accNumbDonor}</td>
				</tr>
			</c:if>

			<c:if test="${accessionCollect ne null}">
				<tr>
					<td><spring:message code="accession.collecting.date" /></td>
					<td>${accessionCollect.collectDate}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.collecting.number" /></td>
					<td>${accessionCollect.collectorsNumb}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.collecting.institute" /></td>
					<td>${accessionCollect.collectingInstitute}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.collecting.site" /></td>
					<td>${accessionCollect.collectSite}</td>
				</tr>
			</c:if>

			<c:if test="${accessionBreeding ne null}">
				<tr>
					<td><spring:message code="accession.breederCode" /></td>
					<td>${accessionBreeding.breederCode}</td>
				</tr>
				<tr>
					<td><spring:message code="accession.pedigree" /></td>
					<td>${accessionBreeding.pedigree}</td>
				</tr>
			</c:if>


			<c:if test="${accessionEnvironment ne null}">
Matija Obreza's avatar
Google Maps V3  
Matija Obreza committed
161 
				<c:if test="${accessionEnvironment.latitude ne null}">
Matija Obreza's avatar
Updates  
Matija Obreza committed
162 163 164 165 
				<tr>
					<td><spring:message code="accession.geolocation" /></td>
					<td>${accessionEnvironment.latitude}, ${accessionEnvironment.longitude}</td>
				</tr>
Matija Obreza's avatar
Google Maps V3  
Matija Obreza committed
166 167 
				</c:if>
				<c:if test="${accessionEnvironment.altitude ne null}">
Matija Obreza's avatar
Updates  
Matija Obreza committed
168 169 170 171 
				<tr>
					<td><spring:message code="accession.altitude" /></td>
					<td>${accessionEnvironment.altitude}<span class="uom">m</span></td>
				</tr>
Matija Obreza's avatar
Google Maps V3  
Matija Obreza committed
172 173 174 175 
				</c:if>
				<c:if test="${accessionEnvironment.latitude ne null}">
				<tr>
					<td colspan="2">
Matija Obreza's avatar
Google Maps: i18n, no streetView  
Matija Obreza committed
176 
						<h4><spring:message code="accession.collecting.site" /></h4>
Matija Obreza's avatar
Loading map i18n  
Matija Obreza committed
177 
						<div id="map" class="gis-map"><spring:message code="maps.loading-map" /></div>
Matija Obreza's avatar
Google Maps V3  
Matija Obreza committed
178 179 180 
					</td>
				</tr>
				</c:if>
Matija Obreza's avatar
Updates  
Matija Obreza committed
181 182 
			</c:if>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
183 184 185 186 

			<c:if test="${accession.svalbardData ne null}">
				<tr>
					<td colspan="2">
Matija Obreza's avatar
Accession sampstat  
Matija Obreza committed
187 
						<h4><spring:message code="accession.svalbard-data" /></h4>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
188 189 190 
					</td>
				</tr>
				<tr>
Matija Obreza's avatar
i18n SGSV  
Matija Obreza committed
191 
					<td><spring:message code="accession.svalbard-data.taxonomy" /></td>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
192 193 194 195 
					<td>${accession.svalbardData.taxonomy}</td>
				</tr>

				<tr>
Matija Obreza's avatar
i18n SGSV  
Matija Obreza committed
196 
					<td><spring:message code="accession.svalbard-data.depositDate" /></td>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
197 198 199 
					<td>${accession.svalbardData.depositDate}</td>
				</tr>
				<tr>
Matija Obreza's avatar
i18n SGSV  
Matija Obreza committed
200 
					<td><spring:message code="accession.svalbard-data.boxNumber" /></td>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
201 202 203 
					<td>${accession.svalbardData.boxNumber}</td>
				</tr>
				<tr>
Matija Obreza's avatar
i18n SGSV  
Matija Obreza committed
204 
					<td><spring:message code="accession.svalbard-data.quantity" /></td>
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
205 206 207 208 209 210 
					<td>${accession.svalbardData.quantity}</td>
				</tr>

			</c:if>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
211 212 
		</tbody>
	</table>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
213
Matija Obreza's avatar
Updates  
Matija Obreza committed
214
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
215 
	<c:if test="${methods.size() gt 0}">
Matija Obreza's avatar
Allow dots in species names as PathVariable  
Matija Obreza committed
216 
		<h4>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
217 
			<spring:message code="accession.methods" />
Matija Obreza's avatar
Allow dots in species names as PathVariable  
Matija Obreza committed
218 
		</h4>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
219 220 221 
		<table>
			<tbody>
				<c:forEach items="${methods}" var="method" varStatus="status">
Matija Obreza's avatar
Format C&E sources  
Matija Obreza committed
222 
					<tr class="targeted" id="method${method.id}">
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
223 224 225 
						<td><c:out value="${method.parameter.title}" /></td>
						<td><c:forEach items="${methodValues[method.id]}" var="val">
								<div>
Matija Obreza's avatar
Spring 3.2.4 fixes issue with JdbcTemplate and closing connections  
Matija Obreza committed
226 
									<c:out value="${method.decode(val.value)}" />
Matija Obreza's avatar
Updates  
Matija Obreza committed
227 
									<span class="uom"><c:out value="${method.unit}" /></span> <sup><a href="#metadata-${val.experimentId}"><c:out value="${val.experimentId}" /></a></sup>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
228 229 
								</div>
							</c:forEach></td>
Matija Obreza's avatar
Allow dots in species names as PathVariable  
Matija Obreza committed
230 
						<td class="notimportant"><c:out value="${method.method}" /></td>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
231 232 233 234 235 236 237 
					</tr>
				</c:forEach>
			</tbody>
		</table>
	</c:if>

	<c:if test="${metadatas.size() gt 0}">
Matija Obreza's avatar
Allow dots in species names as PathVariable  
Matija Obreza committed
238 
		<h4>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
239 
			<spring:message code="accession.metadatas" />
Matija Obreza's avatar
Allow dots in species names as PathVariable  
Matija Obreza committed
240 
		</h4>
Matija Obreza's avatar
Format C&E sources  
Matija Obreza committed
241 
		<ul class="funny-list">
Matija Obreza's avatar
Multiple "crops" possible  
Matija Obreza committed
242 243 244 245 246 247 248 249 250 251 252 253 254 
			<c:forEach items="${metadatas}" var="metadata" varStatus="status">
				<li class="clearfix targeted ${status.count % 2 == 0 ? 'even' : 'odd'}" id="metadata-${metadata.id}">
					<div class="show pull-left">
						<sup><c:out value="${metadata.id}" /></sup> <a href="<c:url value="/data/view/${metadata.id}" />"><c:out value="${metadata.title}" /></a>
					</div>
					<div class="pull-right">
						<c:out value="${metadata.institute}" />
					</div>
					<div class="pull-right">
						<c:out value="${metadata.description}" />
					</div>
				</li>
			</c:forEach>
Matija Obreza's avatar
Format C&E sources  
Matija Obreza committed
255 
		</ul>
Matija Obreza's avatar
Display C&E data  
Matija Obreza committed
256 257 
	</c:if>
Matija Obreza's avatar
Include page variables for GA  
Matija Obreza committed
258 259 
	<script type="text/javascript">
		<c:if test="${accessionEnvironment ne null and accessionEnvironment.latitude ne null}">
Matija Obreza's avatar
Institute map  
Matija Obreza committed
260 261 262 
			jQuery(document).ready(function() {
				var accessionMap=GoogleMaps.map("${pageContext.response.locale.language}", $("#map"), { center: new GoogleMaps.LatLng(${accessionEnvironment.latitude}, ${accessionEnvironment.longitude}), markerTitle: "<spring:escapeBody javaScriptEscape="true">${accession.accessionName}, ${accession.instituteCode}</spring:escapeBody>" });
			});
Matija Obreza's avatar
Include page variables for GA  
Matija Obreza committed
263 264 
		</c:if>
Matija Obreza's avatar
Support for extra GA trackers  
Matija Obreza committed
265 266 267 268 
		<%-- // FIXME Testing GA for IRRI --%>
		<c:if test="${accession.instituteCode=='PHL001'}">
		_pageTrackers=["UA-45878088-1"];
		</c:if>
Matija Obreza's avatar
GA ga.js to analytics.js  
Matija Obreza committed
269 
		_pageDim = { institute: '${accession.instituteCode}', genus: '${accession.taxonomy.genus}' };
Matija Obreza's avatar
Include page variables for GA  
Matija Obreza committed
270 
	</script>
Matija Obreza's avatar
Accession details  
Matija Obreza committed
271 272 
</body>
</html>