Update FaoInstitute countries based on WIEWS code

src/main/java/org/genesys2/server/persistence/domain/GenesysLowlevelRepository.java

@@ -14,13 +14,20 @@
  * limitations under the License.
  **/
 
-
 package org.genesys2.server.persistence.domain;
 
+import org.genesys2.server.model.impl.Country;
+import org.genesys2.server.model.impl.FaoInstitute;
+
 public interface GenesysLowlevelRepository {
 
 	void updateCountryRefs();
 
 	void updateFaoInstituteRefs();
 
+	/**
+	 * Relink {@link FaoInstitute} with {@link Country} based on institute code
+	 */
+	void updateFaoInstituteCountries();
+
 }

src/main/java/org/genesys2/server/persistence/domain/GenesysLowlevelRepositoryImpl.java

@@ -22,6 +22,7 @@ import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
 import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.jdbc.core.JdbcTemplate;
+import org.springframework.security.access.prepost.PreAuthorize;
 import org.springframework.stereotype.Repository;
 import org.springframework.transaction.annotation.Transactional;
 
@@ -38,6 +39,7 @@ public class GenesysLowlevelRepositoryImpl implements GenesysLowlevelRepository
 	}
 
 	@Override
+	@PreAuthorize("hasRole('ADMINISTRATOR')")
 	@Transactional(readOnly = false)
 	public void updateFaoInstituteRefs() {
 		LOG.info("Updating institute references");
@@ -52,10 +54,21 @@ public class GenesysLowlevelRepositoryImpl implements GenesysLowlevelRepository
 	}
 
 	@Override
+	@PreAuthorize("hasRole('ADMINISTRATOR')")
 	@Transactional(readOnly = false)
 	public void updateCountryRefs() {
 		LOG.info("Updating country references");
 		int count = jdbcTemplate.update("UPDATE `accession` A inner join `country` C on C.code3=A.Origin set A.originId=C.id WHERE A.Origin IS NOT NULL;");
 		LOG.info("Country references updated: " + count);
 	}
+	
+
+	@Override
+	@PreAuthorize("hasRole('ADMINISTRATOR')")
+	@Transactional(readOnly = false)
+	public void updateFaoInstituteCountries() {
+		LOG.info("Updating country references");
+		int count = jdbcTemplate.update("UPDATE `faoinstitute` I inner join `country` C on C.code3=left(I.code, 3) set I.countryId=C.id;");
+		LOG.info("Country references updated: " + count);
+	}
 }