Skip to content
GitLab
Projects
Groups
Snippets
Help
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Genesys Backend
Project overview
Project overview
Details
Activity
Releases
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Issues
45
Issues
45
List
Boards
Labels
Service Desk
Milestones
Operations
Operations
Incidents
Packages & Registries
Packages & Registries
Container Registry
Analytics
Analytics
Repository
Value Stream
Wiki
Wiki
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Create a new issue
Commits
Issue Boards
Open sidebar
Genesys PGR
Genesys Backend
Commits
941e0f2e
Commit
941e0f2e
authored
Aug 04, 2017
by
Matija Obreza
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
Tags: accession-details-link and accession-details-url with DOI or ID
parent
bf425918
Changes
17
Hide whitespace changes
Inline
Side-by-side
Showing
17 changed files
with
41 additions
and
20 deletions
+41
-20
src/main/webapp/WEB-INF/jsp/accession/data.jsp
src/main/webapp/WEB-INF/jsp/accession/data.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/accession/details-turtle.jsp
src/main/webapp/WEB-INF/jsp/accession/details-turtle.jsp
+2
-1
src/main/webapp/WEB-INF/jsp/accession/details.jsp
src/main/webapp/WEB-INF/jsp/accession/details.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/accession/explore-es.jsp
src/main/webapp/WEB-INF/jsp/accession/explore-es.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/accession/explore.jsp
src/main/webapp/WEB-INF/jsp/accession/explore.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/accession/explore2.jsp
src/main/webapp/WEB-INF/jsp/accession/explore2.jsp
+2
-2
src/main/webapp/WEB-INF/jsp/accession/resolve.jsp
src/main/webapp/WEB-INF/jsp/accession/resolve.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/metadata/view.jsp
src/main/webapp/WEB-INF/jsp/metadata/view.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/request/index.jsp
src/main/webapp/WEB-INF/jsp/request/index.jsp
+2
-2
src/main/webapp/WEB-INF/jsp/resolver/reverse.jsp
src/main/webapp/WEB-INF/jsp/resolver/reverse.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/search/accessions.jsp
src/main/webapp/WEB-INF/jsp/search/accessions.jsp
+1
-3
src/main/webapp/WEB-INF/jsp/search/index.jsp
src/main/webapp/WEB-INF/jsp/search/index.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/search/index2.jsp
src/main/webapp/WEB-INF/jsp/search/index2.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/search/opensearch.jsp
src/main/webapp/WEB-INF/jsp/search/opensearch.jsp
+1
-1
src/main/webapp/WEB-INF/jsp/selection/index.jsp
src/main/webapp/WEB-INF/jsp/selection/index.jsp
+2
-2
src/main/webapp/WEB-INF/tags/accession-details-link.tag
src/main/webapp/WEB-INF/tags/accession-details-link.tag
+9
-0
src/main/webapp/WEB-INF/tags/accession-details-url.tag
src/main/webapp/WEB-INF/tags/accession-details-url.tag
+13
-0
No files found.
src/main/webapp/WEB-INF/jsp/accession/data.jsp
View file @
941e0f2e
...
@@ -83,7 +83,7 @@
...
@@ -83,7 +83,7 @@
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></td>
<td><
local:accession
-details-link accession="${accession}"
/
></td>
<%-- <td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.taxonName}" /></a></td> --%>
<%-- <td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.taxonName}" /></a></td> --%>
<td><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></td>
<td><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></td>
<%-- <td class="notimportant"><a href="<c:url value="/geo/${accession.origin}" />"><c:out value="${accession.countryOfOrigin.name}" /></a></td> --%>
<%-- <td class="notimportant"><a href="<c:url value="/geo/${accession.origin}" />"><c:out value="${accession.countryOfOrigin.name}" /></a></td> --%>
...
...
src/main/webapp/WEB-INF/jsp/accession/details-turtle.jsp
View file @
941e0f2e
<%@ page
contentType=
"text/turtle;charset=UTF-8"
pageEncoding=
"UTF-8"
language=
"java"
session=
"false"
%><%@ taglib
prefix=
"c"
uri=
"http://java.sun.com/jsp/jstl/core"
%><%@ taglib
prefix=
"security"
uri=
"http://www.springframework.org/security/tags"
%><%@ taglib
prefix=
"spring"
uri=
"http://www.springframework.org/tags"
%><%@ taglib
<%@ page
contentType=
"text/turtle;charset=UTF-8"
pageEncoding=
"UTF-8"
language=
"java"
session=
"false"
%><%@ taglib
prefix=
"c"
uri=
"http://java.sun.com/jsp/jstl/core"
%><%@ taglib
prefix=
"security"
uri=
"http://www.springframework.org/security/tags"
%><%@ taglib
prefix=
"spring"
uri=
"http://www.springframework.org/tags"
%><%@ taglib
prefix=
"fmt"
uri=
"http://java.sun.com/jsp/jstl/fmt"
%>
prefix=
"fmt"
uri=
"http://java.sun.com/jsp/jstl/fmt"
%>
<%@ taglib
prefix=
"local"
tagdir=
"/WEB-INF/tags"
%>
@prefix rdf:
<http:
//www.w3.org/1999/02/22-rdf-syntax-ns#
>
.
@prefix rdf:
<http:
//www.w3.org/1999/02/22-rdf-syntax-ns#
>
.
@prefix wgs84_pos:
<http:
//www.w3.org/2003/01/geo/wgs84_pos#
>
.
@prefix wgs84_pos:
<http:
//www.w3.org/2003/01/geo/wgs84_pos#
>
.
...
@@ -11,7 +12,7 @@
...
@@ -11,7 +12,7 @@
@prefix germplasm:
<http:
//purl.org/germplasm/germplasmTerm#
>
.
@prefix germplasm:
<http:
//purl.org/germplasm/germplasmTerm#
>
.
@prefix germplasmType:
<http:
//purl.org/germplasm/germplasmType#
>
.
@prefix germplasmType:
<http:
//purl.org/germplasm/germplasmType#
>
.
<<
c:url
value=
"http://www.genesys-pgr.org/acn/id/
${accession.id}"
/>>
<<
local:accession-details-url
accession=
"
${accession.id}"
/>>
a germplasm:GermplasmAccession;
a germplasm:GermplasmAccession;
germplasm:germplasmID "
<c:out
value=
"
${
accession
.
id
}
"
/>
";
germplasm:germplasmID "
<c:out
value=
"
${
accession
.
id
}
"
/>
";
dc:identifier "urn:uuid:
<c:out
value=
"
${
accession
.
uuid
}
"
/>
";
dc:identifier "urn:uuid:
<c:out
value=
"
${
accession
.
uuid
}
"
/>
";
...
...
src/main/webapp/WEB-INF/jsp/accession/details.jsp
View file @
941e0f2e
...
@@ -67,7 +67,7 @@
...
@@ -67,7 +67,7 @@
<div
class=
"col-lg-6 col-md-6 col-sm-6 col-xs-12"
>
<div
class=
"col-lg-6 col-md-6 col-sm-6 col-xs-12"
>
<p
property=
"dc:identifier"
>
<p
property=
"dc:identifier"
>
<c:if
test=
"
${
accession
.
doi
ne
null
}
"
>
<c:if
test=
"
${
accession
.
doi
ne
null
}
"
>
<a
href=
"
<c:url
value=
"https://
www.genesys-pgr
.org/${accession.doi}"
/>
"
><c:out
value=
"
${
accession
.
doi
}
"
/></a>
<a
href=
"
<c:url
value=
"https://
dx.doi
.org/${accession.doi}"
/>
"
><c:out
value=
"
${
accession
.
doi
}
"
/></a>
</c:if>
</c:if>
</p>
</p>
</div>
</div>
...
...
src/main/webapp/WEB-INF/jsp/accession/explore-es.jsp
View file @
941e0f2e
...
@@ -257,7 +257,7 @@
...
@@ -257,7 +257,7 @@
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
acceNumb
}
"
/></b></a
></td>
<td><
local:accession
-details-link accession="${accession}"
/
></td>
<%-- <td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.sciName}" /></a></td> --%>
<%-- <td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.sciName}" /></a></td> --%>
<td><span
dir=
"ltr"
class=
"sci-name"
><c:out
value=
"
${
accession
.
taxonomy
.
sciName
}
"
/></span></td>
<td><span
dir=
"ltr"
class=
"sci-name"
><c:out
value=
"
${
accession
.
taxonomy
.
sciName
}
"
/></span></td>
<%-- <td class="notimportant"><a href="<c:url value="/geo/${accession.orgCty.iso3}" />"><c:out value="${accession.orgCty.name}" /></a></td> --%>
<%-- <td class="notimportant"><a href="<c:url value="/geo/${accession.orgCty.iso3}" />"><c:out value="${accession.orgCty.name}" /></a></td> --%>
...
...
src/main/webapp/WEB-INF/jsp/accession/explore.jsp
View file @
941e0f2e
...
@@ -418,7 +418,7 @@
...
@@ -418,7 +418,7 @@
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'} ${accession.historic ? 'historic-record' : ''}"
>
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'} ${accession.historic ? 'historic-record' : ''}"
>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
title=
"
<spring:message
code=
"selection.checkbox"
/>
"
></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
title=
"
<spring:message
code=
"selection.checkbox"
/>
"
></td>
<td><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
acceNumb
}
"
/></b></a
></td>
<td><
local:accession
-details-link accession="${accession}"
/
></td>
<%--<td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.taxonName}" /></a></td> --%>
<%--<td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.taxonName}" /></a></td> --%>
<%--<td><span dir="ltr" class="sci-name"><c:out value="${accession.taxonomy.taxonName}"/></span></td>--%>
<%--<td><span dir="ltr" class="sci-name"><c:out value="${accession.taxonomy.taxonName}"/></span></td>--%>
<%--<td class="notimportant"><a href="<c:url value="/geo/${accession.origin}" />"><c:out value="${accession.countryOfOrigin.name}" /></a></td> --%>
<%--<td class="notimportant"><a href="<c:url value="/geo/${accession.origin}" />"><c:out value="${accession.countryOfOrigin.name}" /></a></td> --%>
...
...
src/main/webapp/WEB-INF/jsp/accession/explore2.jsp
View file @
941e0f2e
...
@@ -193,14 +193,14 @@
...
@@ -193,14 +193,14 @@
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'} ${accession.historic ? 'historic-record' : ''}"
>
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'} ${accession.historic ? 'historic-record' : ''}"
>
<td
class=
"idx-col"
><p>
${status.count + pagedData.size * pagedData.number}
</p></td>
<td
class=
"idx-col"
><p>
${status.count + pagedData.size * pagedData.number}
</p></td>
<td><span
class=
"sel"
x-aid=
"${accession.id}"
title=
"
<spring:message
code=
"selection.checkbox"
/>
"
></span></td>
<td><span
class=
"sel"
x-aid=
"${accession.id}"
title=
"
<spring:message
code=
"selection.checkbox"
/>
"
></span></td>
<td><p><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
acceNumb
}
"
/></b></a
></p></td>
<td><p><
local:accession
-details-link accession="${accession}"
/
></p></td>
<c:forEach
items=
"
${
selectedColumns
}
"
var=
"col"
varStatus=
"i"
>
<c:forEach
items=
"
${
selectedColumns
}
"
var=
"col"
varStatus=
"i"
>
<c:choose>
<c:choose>
<c:when
test=
"
${
col
eq
'doi'
}
"
>
<c:when
test=
"
${
col
eq
'doi'
}
"
>
<td
class=
"notimportant
<c:if
test=
'
${
i
.
count
ge
2
}
'
>
hidden-xs
</c:if>
<c:if
test=
'
${
i
.
count
gt
2
}
'
>
hidden-sm
</c:if>
"
>
<td
class=
"notimportant
<c:if
test=
'
${
i
.
count
ge
2
}
'
>
hidden-xs
</c:if>
<c:if
test=
'
${
i
.
count
gt
2
}
'
>
hidden-sm
</c:if>
"
>
<p>
<p>
<c:if
test=
"
${
accession
.
doi
ne
null
}
"
>
<c:if
test=
"
${
accession
.
doi
ne
null
}
"
>
<a
href=
"
<c:url
value=
"
https://www.genesys-pgr.org
/${accession.doi}"
/>
"
><c:out
value=
"
${
accession
.
doi
}
"
/></a>
<a
href=
"
<c:url
value=
"
${
baseUrl
}
/${accession.doi}"
/>
"
><c:out
value=
"
${
accession
.
doi
}
"
/></a>
</c:if>
</c:if>
</p>
</p>
</td>
</td>
...
...
src/main/webapp/WEB-INF/jsp/accession/resolve.jsp
View file @
941e0f2e
...
@@ -22,7 +22,7 @@
...
@@ -22,7 +22,7 @@
<tbody>
<tbody>
<c:forEach
items=
"
${
accessions
}
"
var=
"accession"
varStatus=
"status"
>
<c:forEach
items=
"
${
accessions
}
"
var=
"accession"
varStatus=
"status"
>
<tr>
<tr>
<td><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></td>
<td><
local:accession
-details-link accession="${accession}"
/
></td>
<td><c:out
value=
"
${
accession
.
countryOfOrigin
.
getName
(
pageContext
.
response
.
locale
)
}
"
/></td>
<td><c:out
value=
"
${
accession
.
countryOfOrigin
.
getName
(
pageContext
.
response
.
locale
)
}
"
/></td>
<td><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></td>
<td><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></td>
<td><a
href=
"
<c:url
value=
"/wiews/${accession.institute.code}"
/>
"
><c:out
value=
"
${
accession
.
institute
.
code
}
"
/></a></td>
<td><a
href=
"
<c:url
value=
"/wiews/${accession.institute.code}"
/>
"
><c:out
value=
"
${
accession
.
institute
.
code
}
"
/></a></td>
...
...
src/main/webapp/WEB-INF/jsp/metadata/view.jsp
View file @
941e0f2e
...
@@ -124,7 +124,7 @@
...
@@ -124,7 +124,7 @@
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<tr
class=
"acn ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></td>
<td><
local:accession
-details-link accession="${accession}"
/
></td>
<%-- <td><a href="<c:url value="/geo/${accession.origin}" />"><c:out value="${accession.countryOfOrigin.getName(pageContext.response.locale)}" /></a></td>
<%-- <td><a href="<c:url value="/geo/${accession.origin}" />"><c:out value="${accession.countryOfOrigin.getName(pageContext.response.locale)}" /></a></td>
--%>
--%>
<td><span
dir=
"ltr"
class=
"sci-name"
><c:out
escapeXml=
"false"
value=
"
${
accession
.
taxonomy
.
taxonNameHtml
}
"
/></span></td>
<td><span
dir=
"ltr"
class=
"sci-name"
><c:out
escapeXml=
"false"
value=
"
${
accession
.
taxonomy
.
taxonNameHtml
}
"
/></span></td>
...
...
src/main/webapp/WEB-INF/jsp/request/index.jsp
View file @
941e0f2e
...
@@ -60,7 +60,7 @@
...
@@ -60,7 +60,7 @@
<td
class=
"sel ${selection.containsId(accession.id) ? 'picked' : ''}"
x-aid=
"${accession.id}"
></td>
<td
class=
"sel ${selection.containsId(accession.id) ? 'picked' : ''}"
x-aid=
"${accession.id}"
></td>
<td><p><spring:message
code=
"accession.availability.${accession.availability}"
/></p></td>
<td><p><spring:message
code=
"accession.availability.${accession.availability}"
/></p></td>
<td><p><spring:message
code=
"accession.historic.${accession.historic}"
/></p></td>
<td><p><spring:message
code=
"accession.historic.${accession.historic}"
/></p></td>
<td><p><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></p></td>
<td><p><
local:accession
-details-link accession="${accession}"
/
></p></td>
<td
class=
"notimportant"
><p><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></p></td>
<td
class=
"notimportant"
><p><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></p></td>
<%-- <td class="notimportant"><c:out value="${accession.countryOfOrigin.getName(pageContext.response.locale)}" /></td> --%>
<%-- <td class="notimportant"><c:out value="${accession.countryOfOrigin.getName(pageContext.response.locale)}" /></td> --%>
<td
class=
"notimportant"
><p><a
href=
"
<c:url
value=
"/wiews/${accession.institute.code}"
/>
"
><c:out
value=
"
${
accession
.
institute
.
code
}
"
/></a></p></td>
<td
class=
"notimportant"
><p><a
href=
"
<c:url
value=
"/wiews/${accession.institute.code}"
/>
"
><c:out
value=
"
${
accession
.
institute
.
code
}
"
/></a></p></td>
...
@@ -87,7 +87,7 @@
...
@@ -87,7 +87,7 @@
</tr>
</tr>
<tr>
<tr>
<td><p><spring:message
code=
"accession.accessionName"
/></p></td>
<td><p><spring:message
code=
"accession.accessionName"
/></p></td>
<td><p><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></p></td>
<td><p><
local:accession
-details-link accession="${accession}"
/
></p></td>
</tr>
</tr>
<tr>
<tr>
<td
class=
"notimportant"
><p><spring:message
code=
"accession.taxonomy"
/></p></td>
<td
class=
"notimportant"
><p><spring:message
code=
"accession.taxonomy"
/></p></td>
...
...
src/main/webapp/WEB-INF/jsp/resolver/reverse.jsp
View file @
941e0f2e
...
@@ -34,7 +34,7 @@
...
@@ -34,7 +34,7 @@
<a
href=
"
<c:url
value=
"/archive/${accession.uuid}"
/>
"
><c:out
value=
"
${
accession
.
accessionName
}
"
/></a>
<a
href=
"
<c:url
value=
"/archive/${accession.uuid}"
/>
"
><c:out
value=
"
${
accession
.
accessionName
}
"
/></a>
</c:when>
</c:when>
<c:otherwise>
<c:otherwise>
<
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><c:out
value=
"
${
accession
.
accessionName
}
"
/></a
>
<
local:accession
-details-link accession="${accession}"
/
>
</c:otherwise>
</c:otherwise>
</c:choose>
</c:choose>
</div>
</div>
...
...
src/main/webapp/WEB-INF/jsp/search/accessions.jsp
View file @
941e0f2e
...
@@ -62,9 +62,7 @@
...
@@ -62,9 +62,7 @@
<tr
class=
"acn ${accession.historic ? 'historic-record' : ''}"
>
<tr
class=
"acn ${accession.historic ? 'historic-record' : ''}"
>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"idx-col"
><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td
class=
"sel"
x-aid=
"${accession.id}"
></td>
<td><a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b>
<td><local:accession
-details-link accession="${accession}"
/></td>
<c:out
value=
"
${
accession
.
acceNumb
}
"
/>
</b></a></td>
<%-- <td><c:forEach items="${accession.aliases}" var="alias"><c:out value="${alias.name}" /> </c:forEach> --%>
<%-- <td><c:forEach items="${accession.aliases}" var="alias"><c:out value="${alias.name}" /> </c:forEach> --%>
</td>
</td>
<%-- <td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.sciName}" /></a></td> --%>
<%-- <td><a href="<c:url value="/acn/t/${accession.taxonomy.genus}/${accession.taxonomy.species}" />"><c:out value="${accession.taxonomy.sciName}" /></a></td> --%>
...
...
src/main/webapp/WEB-INF/jsp/search/index.jsp
View file @
941e0f2e
...
@@ -49,7 +49,7 @@
...
@@ -49,7 +49,7 @@
<a
href=
"
<c:url
value=
"/org/${searchResult.slug}"
/>
"
><c:out
value=
"
${
searchResult
.
slug
}
"
/></a>
<c:out
value=
"
${
searchResult
.
title
}
"
/>
<a
href=
"
<c:url
value=
"/org/${searchResult.slug}"
/>
"
><c:out
value=
"
${
searchResult
.
slug
}
"
/></a>
<c:out
value=
"
${
searchResult
.
title
}
"
/>
</c:when>
</c:when>
<c:when
test=
"
${
clazz
eq
'Accession'
}
"
>
<c:when
test=
"
${
clazz
eq
'Accession'
}
"
>
<
a
href=
"
<c:url
value=
"/acn/id/${searchResult.id}"
/>
"
><c:out
value=
"
${
searchResult
.
accessionName
}
"
/></a>
<c:out
value=
"
${
searchResult
.
taxonomy
.
taxonName
}
${searchResult.instituteCode
}"
/>
<
local:accession
-details-link accession="${searchResult
}"
/>
</c:when>
</c:when>
<c:when
test=
"
${
clazz
eq
'AccessionAlias'
}
"
>
<c:when
test=
"
${
clazz
eq
'AccessionAlias'
}
"
>
<a
href=
"
<c:url
value=
"/acn/id/${searchResult.accession.id}"
/>
"
><c:out
value=
"
${
searchResult
.
name
}
"
/></a>
<c:out
value=
"
${
searchResult
.
accession
.
taxonomy
.
taxonName
}
${searchResult.accession.instituteCode}"
/>
<a
href=
"
<c:url
value=
"/acn/id/${searchResult.accession.id}"
/>
"
><c:out
value=
"
${
searchResult
.
name
}
"
/></a>
<c:out
value=
"
${
searchResult
.
accession
.
taxonomy
.
taxonName
}
${searchResult.accession.instituteCode}"
/>
...
...
src/main/webapp/WEB-INF/jsp/search/index2.jsp
View file @
941e0f2e
...
@@ -92,7 +92,7 @@
...
@@ -92,7 +92,7 @@
<c:when
test=
"
${
section
eq
'accession'
}
"
>
<c:when
test=
"
${
section
eq
'accession'
}
"
>
<td
class=
"idx-col"
><p><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></p></td>
<td
class=
"idx-col"
><p><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></p></td>
<td
class=
"sel"
x-aid=
"${unit.id}"
></td>
<td
class=
"sel"
x-aid=
"${unit.id}"
></td>
<td><p><
a
href=
"
<c:url
value=
"/acn/id/${unit.id}"
/>
"
><b><c:out
value=
"
${
unit
.
acceNumb
}
"
/></b></a
></p></td>
<td><p><
local:accession
-details-link accession="${unit}"
/
></p></td>
<td><p><c:out
value=
"
${
unit
.
taxonomy
.
sciName
}
"
/></p></td>
<td><p><c:out
value=
"
${
unit
.
taxonomy
.
sciName
}
"
/></p></td>
<td
class=
"notimportant"
><p><c:out
value=
"
${
jspHelper
.
getCountry
(
unit
.
orgCty
.
iso3
).
getName
(
pageContext
.
response
.
locale
)
}
"
/></p></td>
<td
class=
"notimportant"
><p><c:out
value=
"
${
jspHelper
.
getCountry
(
unit
.
orgCty
.
iso3
).
getName
(
pageContext
.
response
.
locale
)
}
"
/></p></td>
<td
class=
"notimportant"
><p><spring:message
code=
"accession.sampleStatus.${unit.sampStat}"
/></p></td>
<td
class=
"notimportant"
><p><spring:message
code=
"accession.sampleStatus.${unit.sampStat}"
/></p></td>
...
...
src/main/webapp/WEB-INF/jsp/search/opensearch.jsp
View file @
941e0f2e
...
@@ -31,7 +31,7 @@
...
@@ -31,7 +31,7 @@
<c:forEach
items=
"
${
pagedData
.
content
}
"
var=
"accession"
varStatus=
"status"
>
<c:forEach
items=
"
${
pagedData
.
content
}
"
var=
"accession"
varStatus=
"status"
>
<item>
<item>
<title><c:out
value=
"
${
accession
.
acceNumb
}
"
/></title>
<title><c:out
value=
"
${
accession
.
acceNumb
}
"
/></title>
<link><
c:url
value=
"/acn/id/${accession.id
}"
/></link>
<link><
local:accession
-details-url accession="${accession
}"
/></link>
<description>
<description>
<
![
CDATA
[
<
![
CDATA
[
<
b
><c:out
value=
"
${
accession
.
acceNumb
}
"
/></b>
<
b
><c:out
value=
"
${
accession
.
acceNumb
}
"
/></b>
...
...
src/main/webapp/WEB-INF/jsp/selection/index.jsp
View file @
941e0f2e
...
@@ -79,7 +79,7 @@
...
@@ -79,7 +79,7 @@
<tr
id=
"a${accession.id}"
class=
"acn targeted ${accession.historic ? 'historic-record' : ''} ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<tr
id=
"a${accession.id}"
class=
"acn targeted ${accession.historic ? 'historic-record' : ''} ${status.count % 2 == 0 ? 'even' : 'odd'}"
>
<td
class=
"idx-col"
><p><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></p></td>
<td
class=
"idx-col"
><p><c:out
value=
"
${
status
.
count
+
pagedData
.
size
*
pagedData
.
number
}
"
/></p></td>
<td
class=
"sel ${selection.containsId(accession.id) ? 'picked' : ''}"
x-aid=
"${accession.id}"
></td>
<td
class=
"sel ${selection.containsId(accession.id) ? 'picked' : ''}"
x-aid=
"${accession.id}"
></td>
<td><p><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></p></td>
<td><p><
local:accession
-details-link accession="${accession}"
/
></p></td>
<td><p><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></p></td>
<td><p><c:out
value=
"
${
accession
.
taxonomy
.
taxonName
}
"
/></p></td>
<td
class=
"notimportant"
><p><c:out
value=
"
${
accession
.
countryOfOrigin
.
getName
(
pageContext
.
response
.
locale
)
}
"
/></p></td>
<td
class=
"notimportant"
><p><c:out
value=
"
${
accession
.
countryOfOrigin
.
getName
(
pageContext
.
response
.
locale
)
}
"
/></p></td>
<td
class=
"notimportant"
><p><a
href=
"
<c:url
value=
"/wiews/${accession.institute.code}"
/>
"
><c:out
value=
"
${
accession
.
institute
.
code
}
"
/></a></p></td>
<td
class=
"notimportant"
><p><a
href=
"
<c:url
value=
"/wiews/${accession.institute.code}"
/>
"
><c:out
value=
"
${
accession
.
institute
.
code
}
"
/></a></p></td>
...
@@ -96,7 +96,7 @@
...
@@ -96,7 +96,7 @@
<tbody>
<tbody>
<tr>
<tr>
<td><p><spring:message
code=
"accession.accessionName"
/></p></td>
<td><p><spring:message
code=
"accession.accessionName"
/></p></td>
<td><p><
a
href=
"
<c:url
value=
"/acn/id/${accession.id}"
/>
"
><b><c:out
value=
"
${
accession
.
accessionName
}
"
/></b></a
></p></td>
<td><p><
local:accession
-details-link accession="${accession}"
/
></p></td>
</tr>
</tr>
<tr>
<tr>
<td><p><spring:message
code=
"accession.taxonomy"
/></p></td>
<td><p><spring:message
code=
"accession.taxonomy"
/></p></td>
...
...
src/main/webapp/WEB-INF/tags/accession-details-link.tag
0 → 100644
View file @
941e0f2e
<%@ tag description="Display the non-trasnslated message" pageEncoding="UTF-8" %>
<%@ tag body-content="empty" %>
<%@ taglib prefix="c" uri="http://java.sun.com/jsp/jstl/core" %>
<%@ taglib prefix="local" tagdir="/WEB-INF/tags" %>
<%@ attribute name="accession" required="true" description="Accession" rtexprvalue="true" type="java.lang.Object" %>
<c:if test="${accession ne null}">
<a href='<local:accession-details-url accession="${accession}" />'><b><c:out value="${accession.acceNumb}"/></b></a>
</c:if>
src/main/webapp/WEB-INF/tags/accession-details-url.tag
0 → 100644
View file @
941e0f2e
<%@ tag description="Display the non-trasnslated message" pageEncoding="UTF-8" %>
<%@ tag body-content="empty" %>
<%@ taglib prefix="c" uri="http://java.sun.com/jsp/jstl/core" %>
<%@ attribute name="accession" required="true" description="Accession" rtexprvalue="true" type="java.lang.Object" %>
<c:if test="${accession ne null}">
<c:if test="${accession.doi eq null}">
<c:url value="/acn/id/${accession.id}" />
</c:if>
<c:if test="${accession.doi ne null}">
<c:url value="${baseUrl}/${accession.doi}" />
</c:if>
</c:if>
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment