KPI repositories and tests

src/main/java/org/genesys2/server/model/kpi/BooleanDimension.java

+package org.genesys2.server.model.kpi;
+
+import java.util.HashSet;
+import java.util.Set;
+
+import javax.persistence.Column;
+import javax.persistence.Entity;
+
+@Entity
+public class BooleanDimension extends Dimension<Boolean> {
+
+	@Column
+	private int mode = 3;
+
+	@Override
+	public Set<Boolean> getValues() {
+		Set<Boolean> b = new HashSet<Boolean>();
+		if (hasTrue()) {
+			b.add(Boolean.TRUE);
+		}
+		if ((mode ^ 2) > 0) {
+			b.add(Boolean.FALSE);
+		}
+		return b;
+	}
+
+	public int getMode() {
+		return mode;
+	}
+
+	public void setMode(int mode) {
+		this.mode = mode;
+	}
+
+	public boolean hasTrue() {
+		return (mode & 1) > 0;
+	}
+
+	public void useTrue(boolean use) {
+		if (use)
+			mode |= 1;
+		else
+			mode &= ~1;
+	}
+
+	public boolean hasFalse() {
+		return (mode & 2) > 0;
+	}
+
+	public void useFalse(boolean use) {
+		if (use)
+			mode |= 2;
+		else
+			mode &= ~2;
+	}
+
+}

src/main/java/org/genesys2/server/model/kpi/BooleanListDimension.java

-package org.genesys2.server.model.kpi;
-
-import java.util.Set;
-
-import javax.persistence.CollectionTable;
-import javax.persistence.Column;
-import javax.persistence.ElementCollection;
-import javax.persistence.Entity;
-import javax.persistence.JoinColumn;
-
-@Entity
-public class BooleanListDimension extends FixedListDimension<Boolean> {
-
-	@Column(name = "listvalue", nullable = false)
-	@ElementCollection
-	@CollectionTable(name = "kpidimensionbool", joinColumns = @JoinColumn(name = "dimensionId"))
-	private Set<Boolean> values;
-
-	public void setValues(Set<Boolean> values) {
-		this.values = values;
-	}
-
-	@Override
-	public Set<Boolean> getValues() {
-		return this.values;
-	}
-
-}

src/main/java/org/genesys2/server/model/kpi/Dimension.java

@@ -24,11 +24,11 @@ public abstract class Dimension<T> extends VersionedAuditedModel {
 	private String title;
 
 	final public String getName() {
-		return title;
+		return name;
 	}
 
 	final public void setName(String name) {
-		this.title = name;
+		this.name = name;
 	}
 
 	public void setTitle(String title) {
@@ -40,4 +40,9 @@ public abstract class Dimension<T> extends VersionedAuditedModel {
 	}
 
 	abstract public Set<T> getValues();
+
+	@Override
+	public String toString() {
+		return "id=" + id + " name=" + name + " title=" + title;
+	}
 }

src/main/java/org/genesys2/server/model/kpi/DimensionKey.java

@@ -8,12 +8,12 @@ import javax.persistence.UniqueConstraint;
 import org.genesys2.server.model.BusinessModel;
 
 @Entity
-@Table(name="kpidimensionkey", uniqueConstraints = { @UniqueConstraint(name = "UQ_dimensionkey", columnNames = { "name", "val" }) })
+@Table(name = "kpidimensionkey", uniqueConstraints = { @UniqueConstraint(name = "UQ_dimensionkey", columnNames = { "name", "val" }) })
 public class DimensionKey extends BusinessModel {
 
-	@Column(length = 100, nullable = false)
+	@Column(length = 100, nullable = false, updatable = false)
 	private String name;
-	@Column(name="val", length = 100, nullable = false)
+	@Column(name = "val", length = 100, nullable = false, unique = false)
 	private String value;
 
 	public String getName() {
@@ -34,6 +34,6 @@ public class DimensionKey extends BusinessModel {
 
 	@Override
 	public String toString() {
-		return "{key=" + name + ", value=" + value + "}";
+		return "{id=" + id + ", key=" + name + ", value=" + value + "}";
 	}
 }

src/main/java/org/genesys2/server/model/kpi/Execution.java

@@ -20,7 +20,7 @@ public class Execution extends VersionedAuditedModel {
 	@JoinColumn(name = "parameterId")
 	private KPIParameter parameter;
 
-	@OneToMany(fetch = FetchType.EAGER, cascade = { CascadeType.ALL })
+	@OneToMany(orphanRemoval=true, fetch = FetchType.EAGER, cascade = { CascadeType.ALL })
 	@JoinColumn(name = "executionId")
 	private List<ExecutionDimension> dimensions = new ArrayList<ExecutionDimension>();
 
@@ -44,7 +44,7 @@ public class Execution extends VersionedAuditedModel {
 
 	public String query() {
 		StringBuffer sb = new StringBuffer(), where = new StringBuffer();
-		String alias = "a";
+		String alias = "_base";
 		sb.append("select count(distinct ");
 		sb.append(alias);
 		sb.append(") from ");
@@ -82,6 +82,10 @@ public class Execution extends VersionedAuditedModel {
 
 		return sb.toString();
 	}
+	
+	public List<ExecutionDimension> getExecutionDimensions() {
+		return dimensions;
+	}
 
 	public Dimension<?> getDimension(int depth) {
 		if (depth >= dimensions.size())

src/main/java/org/genesys2/server/model/kpi/ExecutionDimension.java

@@ -2,7 +2,6 @@ package org.genesys2.server.model.kpi;
 
 import javax.persistence.Column;
 import javax.persistence.Entity;
-import javax.persistence.FetchType;
 import javax.persistence.JoinColumn;
 import javax.persistence.ManyToOne;
 import javax.persistence.Table;
@@ -11,9 +10,9 @@ import org.genesys2.server.model.BusinessModel;
 
 @Entity
 @Table(name = "kpiexecutiondimension")
-class ExecutionDimension extends BusinessModel {
+public class ExecutionDimension extends BusinessModel {
 
-	@ManyToOne(cascade = {}, fetch = FetchType.EAGER, optional = false)
+	@ManyToOne(cascade = {}, optional = false)
 	@JoinColumn(name = "dimensionId")
 	private Dimension<?> dimension;
 
@@ -46,4 +45,9 @@ class ExecutionDimension extends BusinessModel {
 		this.link = link;
 	}
 
+	@Override
+	public String toString() {
+		return "id=" + id + " link=" + link + " field=" + field + " dim=" + dimension.getName();
+	}
+
 }
\ No newline at end of file

src/main/java/org/genesys2/server/model/kpi/KPIParameter.java

@@ -2,6 +2,7 @@ package org.genesys2.server.model.kpi;
 
 import javax.persistence.Column;
 import javax.persistence.Entity;
+import javax.persistence.Lob;
 import javax.persistence.Table;
 import javax.persistence.UniqueConstraint;
 
@@ -23,6 +24,9 @@ public class KPIParameter extends VersionedAuditedModel {
 	@Column(name = "`condition`", length = 100)
 	private String condition;
 
+	@Lob
+	private String description;
+
 	public String getName() {
 		return name;
 	}
@@ -55,4 +59,12 @@ public class KPIParameter extends VersionedAuditedModel {
 		this.condition = condition;
 	}
 
+	public void setDescription(String description) {
+		this.description=description;
+	}
+	
+	public String getDescription() {
+		return description;
+	}
+
 }

src/main/java/org/genesys2/server/model/kpi/NumericListDimension.java

 package org.genesys2.server.model.kpi;
 
+import java.util.HashSet;
 import java.util.Set;
 
 import javax.persistence.CollectionTable;
@@ -7,22 +8,69 @@ import javax.persistence.Column;
 import javax.persistence.ElementCollection;
 import javax.persistence.Entity;
 import javax.persistence.JoinColumn;
+import javax.persistence.Transient;
 
 @Entity
 public class NumericListDimension extends FixedListDimension<Number> {
 
-	@Column(name = "listvalue", nullable = false, columnDefinition="double")
-	@ElementCollection
+	@Column(length = 100)
+	private String javaType = "java.lang.Integer";
+
+	@Transient
+	private Class<?> clazz;
+
+	@Column(name = "listvalue", nullable = false)
+	@ElementCollection()
 	@CollectionTable(name = "kpidimensionnumeric", joinColumns = @JoinColumn(name = "dimensionId"))
-	private Set<Number> values;
+	private Set<Double> values;
 
-	public void setValues(Set<Number> values) {
-		this.values = values;
+	public void setValues(Set<Number> list) {
+		Set<Double> doubles = new HashSet<Double>();
+		for (Number n : list) {
+			doubles.add(n.doubleValue());
+		}
+		this.values = doubles;
 	}
 
 	@Override
 	public Set<Number> getValues() {
-		return this.values;
+		Set<Number> numbers = new HashSet<Number>();
+		for (double d : values) {
+			numbers.add(toType(d));
+		}
+		return numbers;
+	}
+
+	private Number toType(Double d) {
+		if (this.clazz == Integer.class) {
+			return d.intValue();
+		} else if (this.clazz == Long.class) {
+			return d.longValue();
+		} else if (this.clazz == Float.class) {
+			return d.floatValue();
+		} else if (this.clazz == Double.class) {
+			return d;
+		} else if (this.clazz == Short.class) {
+			return d.shortValue();
+		} else if (this.clazz == Byte.class) {
+			return d.byteValue();
+		}
+		return null;
 	}
 
+	public Class<?> getClazz() {
+		if (clazz == null) {
+			try {
+				this.clazz = Class.forName(javaType);
+			} catch (ClassNotFoundException e) {
+				throw new RuntimeException(e.getMessage(), e);
+			}
+		}
+		return clazz;
+	}
+
+	public void setClazz(Class<?> clazz) {
+		this.clazz = clazz;
+		this.javaType = this.clazz.getName();
+	}
 }

src/main/java/org/genesys2/server/model/kpi/Observation.java

@@ -33,7 +33,7 @@ public class Observation extends BusinessModel {
 	@JoinColumn(name = "parameterId")
 	private KPIParameter parameter;
 
-	@ManyToMany(fetch = FetchType.EAGER)
+	@ManyToMany(fetch = FetchType.LAZY)
 	@JoinTable(name = "kpiobservationdimension", joinColumns = @JoinColumn(name = "observationId"), inverseJoinColumns = @JoinColumn(name = "dimensionId"))
 	private Set<DimensionKey> dimensions = new HashSet<DimensionKey>();
 
@@ -57,8 +57,8 @@ public class Observation extends BusinessModel {
 		return parameter;
 	}
 
-	public void setParameter(KPIParameter kPIParameter) {
-		this.parameter = kPIParameter;
+	public void setParameter(KPIParameter parameter) {
+		this.parameter = parameter;
 	}
 
 	public Set<DimensionKey> getDimensions() {

src/main/java/org/genesys2/server/model/kpi/StringListDimension.java

@@ -12,7 +12,7 @@ import javax.persistence.JoinColumn;
 public class StringListDimension extends FixedListDimension<String> {
 
 	@Column(name = "listvalue", nullable = false)
-	@ElementCollection
+	@ElementCollection()
 	@CollectionTable(name = "kpidimensionstring", joinColumns = @JoinColumn(name = "dimensionId"))
 	private Set<String> values;
 

src/main/java/org/genesys2/server/persistence/domain/kpi/DimensionKeyRepository.java

+/**
+ * Copyright 2014 Global Crop Diversity Trust
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ **/
+
+package org.genesys2.server.persistence.domain.kpi;
+
+import org.genesys2.server.model.kpi.DimensionKey;
+import org.springframework.data.jpa.repository.JpaRepository;
+
+public interface DimensionKeyRepository extends JpaRepository<DimensionKey, Long> {
+
+	DimensionKey findByNameAndValue(String name, String value);
+
+}

src/main/java/org/genesys2/server/persistence/domain/kpi/DimensionRepository.java

+/**
+ * Copyright 2014 Global Crop Diversity Trust
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ **/
+
+package org.genesys2.server.persistence.domain.kpi;
+
+import org.genesys2.server.model.kpi.Dimension;
+import org.springframework.data.jpa.repository.JpaRepository;
+
+public interface DimensionRepository extends JpaRepository<Dimension<?>, Long> {
+
+}

src/main/java/org/genesys2/server/persistence/domain/kpi/ExecutionRepository.java

+/**
+ * Copyright 2014 Global Crop Diversity Trust
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ **/
+
+package org.genesys2.server.persistence.domain.kpi;
+
+import org.genesys2.server.model.kpi.Execution;
+import org.springframework.data.jpa.repository.JpaRepository;
+
+public interface ExecutionRepository extends JpaRepository<Execution, Long> {
+
+}

src/main/java/org/genesys2/server/persistence/domain/kpi/KPIParameterRepository.java

+/**
+ * Copyright 2014 Global Crop Diversity Trust
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ **/
+
+package org.genesys2.server.persistence.domain.kpi;
+
+import org.genesys2.server.model.kpi.KPIParameter;
+import org.springframework.data.jpa.repository.JpaRepository;
+
+public interface KPIParameterRepository extends JpaRepository<KPIParameter, Long> {
+
+	KPIParameter findByName(String name);
+
+}

src/main/java/org/genesys2/server/persistence/domain/kpi/ObservationRepository.java

+/**
+ * Copyright 2014 Global Crop Diversity Trust
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ **/
+
+package org.genesys2.server.persistence.domain.kpi;
+
+import org.genesys2.server.model.kpi.Observation;
+import org.springframework.data.jpa.repository.JpaRepository;
+
+public interface ObservationRepository extends JpaRepository<Observation, Long> {
+
+}

src/main/java/org/genesys2/server/service/KPIService.java

 package org.genesys2.server.service;
 
+import java.util.List;
+
+import org.genesys2.server.model.kpi.Dimension;
+import org.genesys2.server.model.kpi.Execution;
+import org.genesys2.server.model.kpi.JpaDimension;
+import org.genesys2.server.model.kpi.KPIParameter;
+import org.genesys2.server.model.kpi.Observation;
+
 public interface KPIService {
 
-	void test1();
+	long getSingleResult(String paQuery, Object... params);
+
+	KPIParameter save(KPIParameter parameter);
+
+	KPIParameter getParameter(String name);
+
+	KPIParameter getParameter(long id);
+
+	void delete(KPIParameter loaded);
+
+	Dimension<?> save(Dimension<?> dimension);
+
+	Dimension<?> getDimension(long id);
+
+	List<?> getValues(JpaDimension loadedJpa);
+
+	Execution save(Execution execution);
+
+	Execution getExecution(long id);
+
+	void delete(Execution execution);
+
+	List<Observation> execute(Execution execution);
+	List<Observation> save(List<Observation> observations);
 
-	Object getSingleResult(String paQuery, Object... params);
+	void delete(List<Observation> observations);
 
 }

src/main/java/org/genesys2/server/service/impl/KPIServiceImpl.java

 package org.genesys2.server.service.impl;
 
+import java.util.ArrayList;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+
 import javax.persistence.EntityManager;
 import javax.persistence.PersistenceContext;
 import javax.persistence.Query;
 
 import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
+import org.genesys2.server.model.kpi.Dimension;
+import org.genesys2.server.model.kpi.DimensionKey;
+import org.genesys2.server.model.kpi.Execution;
+import org.genesys2.server.model.kpi.JpaDimension;
+import org.genesys2.server.model.kpi.KPIParameter;
+import org.genesys2.server.model.kpi.Observation;
+import org.genesys2.server.persistence.domain.kpi.DimensionKeyRepository;
+import org.genesys2.server.persistence.domain.kpi.DimensionRepository;
+import org.genesys2.server.persistence.domain.kpi.ExecutionRepository;
+import org.genesys2.server.persistence.domain.kpi.ObservationRepository;
+import org.genesys2.server.persistence.domain.kpi.KPIParameterRepository;
 import org.genesys2.server.service.KPIService;
+import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.stereotype.Service;
 import org.springframework.transaction.annotation.Transactional;
 
@@ -18,23 +35,179 @@ public class KPIServiceImpl implements KPIService {
 	@PersistenceContext
 	private EntityManager entityManager;
 
+	@Autowired
+	private DimensionRepository dimensionRepository;
+
+	@Autowired
+	private KPIParameterRepository parameterRepository;
+
+	@Autowired
+	private ExecutionRepository executionRepository;
+
+	@Autowired
+	private ObservationRepository observationRepository;
+
+	@Autowired
+	private DimensionKeyRepository dimensionKeyRepository;
+
+	@Override
+	@Transactional
+	public KPIParameter save(KPIParameter parameter) {
+		return parameterRepository.save(parameter);
+	}
+
+	@Override
+	public KPIParameter getParameter(long id) {
+		return parameterRepository.findOne(id);
+	}
+
+	@Override
+	public KPIParameter getParameter(String name) {
+		return parameterRepository.findByName(name);
+	}
+
+	@Override
+	@Transactional
+	public void delete(KPIParameter parameter) {
+		parameterRepository.delete(parameter);
+	}
+
+	@Override
+	@Transactional
+	public