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Genesys PGR
Genesys Backend
Commits
eacc0568
Commit
eacc0568
authored
Dec 29, 2014
by
Matija Obreza
Browse files
Cleanup
parent
2fa322e5
Changes
2
Hide whitespace changes
Inline
Side-by-side
src/main/java/org/genesys2/server/service/impl/DownloadServiceImpl.java
View file @
eacc0568
...
...
@@ -111,15 +111,15 @@ public class DownloadServiceImpl implements DownloadService {
c
.
setCellStyle
(
dateStyle
);
c
.
setCellValue
(
new
Date
());
r
=
legal
.
createRow
(
4
);
r
.
createCell
(
0
).
setCellValue
(
"
Server URL
"
);
r
.
createCell
(
0
).
setCellValue
(
"
Attribution
"
);
r
.
createCell
(
1
).
setCellValue
(
baseUrl
+
"/content/terms"
);
((
SXSSFSheet
)
legal
).
flushRows
();
final
Sheet
sheet
=
wb
.
getSheet
(
"MCPD"
);
final
ArrayList
<
Long
>
batch
=
new
ArrayList
<
Long
>(
100
);
final
Writer
writer
=
new
Writer
();
final
Writer
writer
=
new
Writer
();
// Write accession information
genesysLowlevelRepository
.
listAccessionIds
(
filters
,
new
Sort
(
"acceNumb"
),
new
RowCallbackHandler
()
{
@Override
...
...
@@ -322,11 +322,13 @@ public class DownloadServiceImpl implements DownloadService {
return
otherNames
+
";"
+
name
;
}
p
rivate
String
toMcpdArray
(
List
<
Integer
>
stoRage
)
{
if
(
stoRage
==
null
||
stoRage
.
size
()
==
0
)
p
ublic
static
String
toMcpdArray
(
List
<
Integer
>
integers
)
{
if
(
integers
==
null
||
integers
.
size
()
==
0
)
return
null
;
String
s
=
""
;
for
(
Integer
i
:
stoRage
)
{
for
(
Integer
i
:
integers
)
{
if
(
i
==
null
)
continue
;
if
(
s
.
length
()
>
0
)
s
+=
";"
;
s
+=
i
;
...
...
src/main/java/org/genesys2/server/service/impl/GenesysServiceImpl.java
View file @
eacc0568
...
...
@@ -468,7 +468,13 @@ public class GenesysServiceImpl implements GenesysService, DatasetService {
for
(
AccessionAlias
aa
:
accessionAliasRepository
.
findAllFor
(
accessionIds
))
{
AllStuff
all
=
map
.
get
(
aa
.
getAccession
().
getId
());
all
.
names
.
add
(
aa
);
if
(
all
==
null
)
{
System
.
err
.
println
(
aa
.
getAccession
().
getId
()
+
" not in the list! "
+
aa
);
}
else
if
(
aa
==
null
)
{
System
.
err
.
println
(
"aa is null"
);
}
else
{
all
.
names
.
add
(
aa
);
}
}
for
(
AccessionRemark
ar
:
accessionRemarkRepository
.
findAllFor
(
accessionIds
))
{
...
...
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