Merge branch '192-map-click-accessions-list' into 'master'

Map click accessions list

Closes #192

See merge request genesys-pgr/genesys-ui!192

locales/en/translations.json

@@ -1476,7 +1476,7 @@
       "NumericListDimension": "NumericListDimension",
       "StringListDimension": "StringListDimension"
     },
-    "showRun": "Show run info",
+    "showRun": "Show",
     "executionRunsLoaded": "Execution runs loaded successfully"
   }
 }

src/accessions/actions/public.ts

@@ -9,8 +9,9 @@ import AccessionFilter from 'model/accession/AccessionFilter';
 import AccessionDetails from 'model/accession/AccessionDetails';
 import AccessionMapInfo from 'model/accession/AccessionMapInfo';
 import AccessionAuditLog from 'model/accession/AccessionAuditLog';
+import MapLayer from 'model/genesys/MapTileLayer';
 
-import { RECEIVE_ACCESSIONS, RECEIVE_ACCESSION, RECEIVE_ACCESSION_OVERVIEW, APPEND_ACCESSIONS, RECEIVE_ACCESSION_MAPINFO, RECEIVE_ACCESSION_AUDIT_LOG } from 'accessions/constants';
+import { RECEIVE_ACCESSIONS, RECEIVE_ACCESSION, RECEIVE_ACCESSION_OVERVIEW, APPEND_ACCESSIONS, RECEIVE_ACCESSION_MAPINFO, RECEIVE_ACCESSION_AUDIT_LOG, RECEIVE_TILE_LAYER } from 'accessions/constants';
 import AccessionService from 'service/genesys/AccessionService';
 import { showSnackbar } from 'actions/snackbar';
 import Page from 'model/Page';
@@ -199,3 +200,13 @@ export const overviewAccessions = (filterCode: string) => (dispatch) => {
       dispatch(receiveAccessionOverview(null, error));
     });
 };
+
+// TileLayers
+const receiveTileLayerInfo = (tileLayer: MapLayer) => ({
+  type: RECEIVE_TILE_LAYER,
+  payload: {tileLayer},
+});
+
+export const  updateTileLayerInfo = (tileLayer: MapLayer) => (dispatch) => {
+  return dispatch(receiveTileLayerInfo(tileLayer));
+};

src/accessions/constants.ts

 export const RECEIVE_ACCESSIONS = 'accessions/RECEIVE_ACCESSIONS';
 export const APPEND_ACCESSIONS = 'accessions/APPEND_ACCESSIONS';
 export const RECEIVE_ACCESSION_OVERVIEW = 'accessions/RECEIVE_ACCESSION_OVERVIEW';
+export const RECEIVE_TILE_LAYER = 'accessions/RECEIVE_TILE_LAYER';
 export const RECEIVE_ACCESSION_AUDIT_LOG = 'accessions/RECEIVE_ACCESSION_AUDIT_LOG';
 export const RECEIVE_ACCESSION = 'accessions/RECEIVE_ACCESSION';
 export const RECEIVE_ACCESSION_MAPINFO = 'accessions/RECEIVE_ACCESSION_MAPINFO';

src/accessions/reducers/public.ts

 import update from 'immutability-helper';
 
 import { IReducerAction } from 'model/common.model';
-import { RECEIVE_ACCESSIONS, RECEIVE_ACCESSION, RECEIVE_ACCESSION_OVERVIEW, APPEND_ACCESSIONS, RECEIVE_ACCESSION_MAPINFO, RECEIVE_ACCESSION_AUDIT_LOG } from 'accessions/constants';
+import {
+  RECEIVE_ACCESSIONS,
+  RECEIVE_ACCESSION,
+  RECEIVE_ACCESSION_OVERVIEW,
+  APPEND_ACCESSIONS,
+  RECEIVE_ACCESSION_MAPINFO,
+  RECEIVE_ACCESSION_AUDIT_LOG,
+  RECEIVE_TILE_LAYER,
+} from 'accessions/constants';
 
 import FilteredPage from 'model/FilteredPage';
 import Accession from 'model/accession/Accession';
 import AccessionMapInfo from 'model/accession/AccessionMapInfo';
 import AccessionOverview from 'model/accession/AccessionOverview';
 import AccessionAuditLog from 'model/accession/AccessionAuditLog';
+import MapLayer, { AVAILABLE_LAYERS } from 'model/genesys/MapTileLayer';
 
 const INITIAL_STATE: {
   accession: Accession;
@@ -17,6 +26,7 @@ const INITIAL_STATE: {
   pagedError: any;
   overview: AccessionOverview;
   mapInfo: AccessionMapInfo;
+  mapLayers: MapLayer[]
 } = {
   accession: null,
   auditLog: null,
@@ -25,6 +35,7 @@ const INITIAL_STATE: {
   pagedError: null,
   overview: null,
   mapInfo: null,
+  mapLayers: AVAILABLE_LAYERS,
 };
 
 function publicAccessions(state = INITIAL_STATE, action: IReducerAction) {
@@ -109,6 +120,16 @@ function publicAccessions(state = INITIAL_STATE, action: IReducerAction) {
         overview: {$set: null},
       });
     }
+    case RECEIVE_TILE_LAYER: {
+      const {tileLayer} = action.payload;
+      const indexToUpdate = state.mapLayers.findIndex((layerItem) => layerItem.name === tileLayer.name);
+
+      return update(state, {
+        mapLayers: {
+          [indexToUpdate]: {$set: tileLayer},
+        },
+      });
+    }
 
     default:
       return state;

src/accessions/ui/MapPage.tsx

@@ -8,19 +8,20 @@ import { loadAccessionsMapInfo } from 'accessions/actions/public';
 import AccessionFilter from 'model/accession/AccessionFilter';
 import Loading from 'ui/common/Loading';
 import AccessionMapInfo from 'model/accession/AccessionMapInfo';
-import PageLayout from 'ui/layout/PageLayout';
-import ContentHeader from 'ui/common/heading/ContentHeader';
+import MapLayer from 'model/genesys/MapTileLayer';
 import Button from '@material-ui/core/Button';
 import Tabs, { Tab } from 'ui/common/Tabs';
 import PrettyFilters from 'ui/common/filter/PrettyFilters';
 import ButtonBar from 'ui/common/buttons/ButtonBar';
+import ContentLayout from 'ui/layout/ContentLayout';
+import MapConfigSection from './c/MapConfigSection';
 
 import AccessionService from 'service/genesys/AccessionService';
 
 let Map;
 let TileLayer;
 let Popup;
-let Marker;
+let Rectangle;
 
 const popupContentLimit = 11;
 
@@ -33,6 +34,7 @@ interface IMapPageProps {
     currentTab: string;
     filterCode: string;
     loadAccessionsMapInfo: any;
+    mapLayers: MapLayer[];
 }
 
 const styles = (theme) => ({
@@ -54,7 +56,8 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
     ];
 
     public state = {
-      popupPosition: [],
+      clickLocation: [],
+      searchBox: null,
       geoData: [],
       otherCount: 0,
     };
@@ -64,8 +67,8 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
         if (typeof window !== 'undefined') {
             Map = require('react-leaflet').Map;
             TileLayer = require('react-leaflet').TileLayer;
-            Marker = require('react-leaflet').Marker;
             Popup = require('react-leaflet').Popup;
+            Rectangle = require('react-leaflet').Rectangle;
         }
     }
 
@@ -103,21 +106,27 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
 
             console.log(e);
 
+            const width = Math.pow(2, currentZoom - 2);
+            console.log(`zoom=${currentZoom} width=${width} diff=${ 3 / width}`);
+            const searchBounds: number[][] = [
+                [ e.latlng.lat - (3 / width), correctLng - (3 / width) ],
+                [ e.latlng.lat + (3 / width), correctLng + (3 / width) ],
+            ];
             const filterWithGeo = {
                 ...filter,
                 geo: {
                     longitude: {
-                        ge: correctLng - (3 / currentZoom),
-                        le: correctLng + (3 / currentZoom),
+                        ge: searchBounds[0][1],
+                        le: searchBounds[1][1],
                     },
                     latitude: {
-                        ge: e.latlng.lat - (3 / currentZoom),
-                        le: e.latlng.lat + (3 / currentZoom),
+                        ge: searchBounds[0][0],
+                        le: searchBounds[1][0],
                     },
                 },
             };
             AccessionService.geoJson(filterWithGeo, popupContentLimit)
-                .then((res) => this.setState({popupPosition: [ e.latlng.lat,  e.latlng.lng], geoData: res.geoJson, otherCount: res.otherCount}));
+                .then((res) => this.setState({clickLocation: [ e.latlng.lat,  e.latlng.lng], searchBox: searchBounds, geoData: res.geoJson, otherCount: res.otherCount}));
         }, 200);
     }
 
@@ -129,10 +138,10 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
     }
 
     public render() {
-        const {popupPosition, geoData, otherCount} = this.state;
+        const { searchBox, geoData, otherCount } = this.state;
         const position = [30, 0];
 
-        const { mapInfo, currentTab, classes, filterCode, t } = this.props;
+        const { mapInfo, mapLayers, currentTab, classes, filterCode, t } = this.props;
 
         if (! mapInfo) {
           return <Loading />;
@@ -142,8 +151,11 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
         const layerUrl = `{s}/acn/tile/{z}/{x}/{y}?f=${filterCode ? filterCode : ''}`; // `&color=${color}`;
 
         return (
-            <PageLayout withFooter>
-              <ContentHeader title={ t('accessions.public.p.browse.title') } subTitle={ t('accessions.public.p.browse.subTitle') } />
+            <ContentLayout
+              right={ <MapConfigSection/> }
+              rightAlwaysCollapsible
+              customHeaderHeight
+            >
                 <Tabs
                     tab={ currentTab }
                     actions={
@@ -174,18 +186,16 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
                         zoom={ 3 } minZoom={ 2 } maxZoom={ 14 }
                         bounds={ mapInfo.bounds }>
                         <TileLayer
+                            zIndex={ 0 }
                             opacity={ 0.50 }
                             attribution={ '&copy; <a href="http://www.openstreetmap.org/copyright">OpenStreetMap</a> contributors' }
                             url={ 'https://tiles.wmflabs.org/bw-mapnik/{z}/{x}/{y}.png' }
                         />
+
+                        { mapLayers && mapLayers.filter((layer) => layer.enabled).map((layer, index) => <TileLayer zIndex={ index + 1 } key={ layer.name } { ...layer }/>) }
+
                         <TileLayer
-                            opacity={ 0.50 }
-                            maxZoom={ 7 }
-                            attribution={ '&copy; worldclim.org' }
-                            url={ 'https://{s}.tile.genesys-pgr.org/worldclim1.4/bio1/{z}/{x}/{y}.png' }
-                            subdomains={ [ 'a', 'b', 'c', 'd' ] }
-                        />
-                        <TileLayer
+                            zIndex={ mapLayers.length + 1 }
                             updateInterval={ 1000 }
                             updateWhenZooming={ false }
                             attribution="&amp;copy Accession localities from <a href=&quot;/&quot;>Genesys PGR</a>"
@@ -193,25 +203,29 @@ class BrowsePage extends React.Component<IMapPageProps, any> {
                             subdomains={ mapInfo.tileServers }
                         />
                         { geoData && geoData.length > 0 &&
-                            <Marker position={ popupPosition } ref={ (marker) => marker && marker.leafletElement.openPopup() } >
+                            <Rectangle
+                              bounds={ searchBox }
+                              ref={ (marker) => marker && marker.leafletElement.openPopup() }
+                            >
                                 <Popup open>
                                     <div>
                                         { geoData.map((feature) => (<div><Link to={ `/a/${feature.properties.uuid}` }>{ `${feature.properties.accessionNumber} ${feature.properties.instCode}` }</Link></div>)) }
                                         { otherCount > 0 && <div>{ t('accessions.public.p.map.andMore', {otherMore: otherCount}) }</div> }
                                     </div>
                                 </Popup>
-                            </Marker>
+                            </Rectangle>
                         }
                     </Map>
                 }
                 </div>
-            </PageLayout>
+            </ContentLayout>
         );
     }
 }
 
 const mapStateToProps = (state, ownProps) => ({
     mapInfo: state.accessions.public.mapInfo || undefined,
+    mapLayers: state.accessions.public.mapLayers,
     filterCode: ownProps.match.params.filterCode || '',
     currentTab: ownProps.match.params.tab || 'map', // current tab, or ownProps.location.pathname
 });

src/accessions/ui/c/MapConfigSection.tsx

+import * as React from 'react';
+import { connect } from 'react-redux';
+// model
+import MapLayer from 'model/genesys/MapTileLayer';
+// ui
+import withStyles from '@material-ui/core/styles/withStyles';
+import ExpandFiltersComponent from 'ui/common/filter/ExpandFiltersComponent';
+import { Divider } from '@material-ui/core';
+import MapLayerConfig from './MapLayerConfig';
+
+/*tslint:disable*/
+const styles = (theme) => ({
+  root: {
+    overflow: 'hidden' as 'hidden',
+  },
+  layersTitle: {
+    paddingLeft: '8px',
+    fontSize: '15px',
+    fontWeight: 700,
+    lineHeight: '40px',
+    color: '#81807f',
+    textTransform: 'uppercase' as 'uppercase',
+  },
+});
+
+interface IMapConfigSectionProps extends React.ClassAttributes<any> {
+  classes: any;
+  mapLayers: MapLayer[];
+}
+
+class MapConfigSection extends React.Component<IMapConfigSectionProps> {
+
+  public render() {
+    const {classes, mapLayers} = this.props;
+    return (
+      <div className={ classes.root }>
+        <ExpandFiltersComponent title="Configure map"/>
+        <span className={ classes.layersTitle }>Layers</span>
+        <Divider/>
+        { mapLayers.map((layer) => <MapLayerConfig layer={ layer }/>) }
+      </div>
+    );
+  }
+}
+
+const mapStateToProps = (state, ownProps) => ({
+  mapLayers: state.accessions.public.mapLayers,
+});
+
+
+export default connect(mapStateToProps, null)(withStyles(styles)(MapConfigSection));
\ No newline at end of file

src/accessions/ui/c/MapLayerConfig.tsx

+import * as React from 'react';
+import {bindActionCreators} from 'redux';
+import {connect} from 'react-redux';
+import { translate } from 'react-i18next';
+import withStyles from '@material-ui/core/styles/withStyles';
+
+// actions
+import { updateTileLayerInfo } from 'accessions/actions/public';
+// model
+import MapLayer from 'model/genesys/MapTileLayer';
+// ui
+import CollapsibleComponentSearch from 'ui/common/filter/CollapsibleComponentSearch';
+import { Slider } from '@material-ui/lab';
+import FormControlLabel from '@material-ui/core/FormControlLabel';
+import Checkbox from '@material-ui/core/Checkbox';
+import { Divider } from '@material-ui/core';
+
+/*tslint:disable*/
+const styles = (theme) => ({
+  root: {
+    color: 'initial' as 'initial',
+    whiteSpace: 'initial' as 'initial',
+    '& > div > div > span ': {
+      color: 'initial' as 'initial',
+      fontWeight: 500,
+    }
+  },
+  rootOpened: {
+    backgroundColor: '#e9e9e9',
+  },
+  content: {
+    backgroundColor: '#f3f2ee',
+    margin: '0 -20px -20px -20px',
+    padding: '0 20px 20px 20px',
+  },
+  opacitySlider: {
+    padding: '8px',
+    display: 'flex' as 'flex',
+    alignItems: 'center' as 'center'
+  },
+  opacitySliderLabel: {
+    flexShrink: 0,
+    fontSize: '12px',
+    position: 'relative' as 'relative',
+    left: '-8px',
+  },
+  description: {
+    margin: '0 -20px',
+    padding: '8px 20px',
+    whiteSpace: 'initial' as 'initial',
+  },
+  statusCheckbox: {
+    width: '100%',
+    display: 'flex' as 'flex',
+    justifyContent: 'space-between' as 'space-between',
+    flexDirection: 'row-reverse' as 'row-reverse',
+    marginLeft: '0px',
+  },
+  copyright: {
+    color: 'grey',
+    fontSize: '12px',
+  }
+});
+
+/*tslint:enable*/
+
+
+interface IMapLayerConfigProps extends React.ClassAttributes<any> {
+  title: string;
+  classes: any;
+  t: any;
+  layer: MapLayer;
+  updateTileLayerInfo: (layerInfo: MapLayer) => void;
+}
+
+class MapLayerConfig extends React.Component<IMapLayerConfigProps> {
+
+  public state = {
+    show: false,
+  };
+
+  public componentWillMount() {
+    const {layer} = this.props;
+    if (layer && layer.enabled) {
+      this.setState({show: true});
+    }
+  }
+
+
+  public render() {
+    const {classes, layer, t} = this.props;
+    const {show} = this.state;
+    return (
+
+      <div className={ `${ classes.root } ${ show && classes.rootOpened }` }>
+        <CollapsibleComponentSearch
+          title={ layer.title }
+          collapsed={ !show }
+          onToggleCollapsed={ (show) => this.setState({show}) }
+        >
+          <Divider style={ {margin: '0 -20px'} }/>
+          <div className={ classes.content }>
+            <div className={ classes.description }>
+              <div>{ t(layer.description) }</div>
+            </div>
+
+            <div className={ classes.opacitySlider }>
+              <div className={ classes.opacitySliderLabel }>{ `Opacity: ${ Number(layer.opacity).toFixed(2) }` }</div>
+              <Slider
+                min={ 0 }
+                step={ 0.05 }
+                max={ 1.0 }
+                onChange={ this.handleSliderChange }
+                value={ layer.opacity }
+                color="#88ba42"
+              />
+            </div>
+
+            <FormControlLabel
+              className={ classes.statusCheckbox }
+              label="Enabled"
+              control={
+                <Checkbox
+                  checked={ layer.enabled }
+                  onChange={ this.handleCheckBoxChange }
+                />
+              }
+            />
+          </div>
+
+          <span className={ `float-right ${ classes.copyright }` }>{ layer.attribution }</span>
+        </CollapsibleComponentSearch>
+      </div>
+    );
+  }
+
+  private handleSliderChange = (e, value) => {
+   const {updateTileLayerInfo, layer} = this.props;
+   updateTileLayerInfo({...layer, opacity: value});
+  }
+
+  private handleCheckBoxChange = (e, value) => {
+    const {updateTileLayerInfo, layer} = this.props;
+    updateTileLayerInfo({...layer, enabled: value});
+  }
+}
+const mapDispatchToProps = (dispatch) => bindActionCreators({
+  updateTileLayerInfo,
+}, dispatch);
+
+export default translate()(connect(null, mapDispatchToProps)(withStyles(styles)(MapLayerConfig)));

src/model/genesys/MapTileLayer.ts

+class MapLayer {
+  public name: string;
+  public title: string;
+  public description: string;
+  public url: string;
+  public enabled: boolean;
+  public opacity: number;
+  public attribution: string;
+  public maxZoom: number;
+  public subdomains: string[];
+
+  public constructor() {
+    this.enabled = false;
+    this.opacity = 0.5;
+    this.attribution = '© worldclim.org';
+    this.maxZoom = 7;
+    this.subdomains = ['a', 'b', 'c', 'd'];
+  }
+}
+
+const layerNames = ['bio1', 'bio5', 'bio6', 'bio12', 'bio13', 'bio14'];
+
+export const AVAILABLE_LAYERS = layerNames.map((layerName) => ({
+  ...new MapLayer(),
+  name: layerName,
+  title: `accessions.climate.${ layerName }`,
+  description: `accessions.climateDescription.${ layerName }`,
+  url: `https://{s}.tile.genesys-pgr.org/worldclim1.4/${ layerName }/{z}/{x}/{y}.png`,
+}));
+
+export default MapLayer;

src/ui/common/filter/CollapsibleComponentSearch.tsx

@@ -8,6 +8,7 @@ import Divider from '@material-ui/core/Divider';
 interface ICollapsibleComponentSearch extends React.ClassAttributes<any> {
     classes: any;
     title: string;
+    onToggleCollapsed?: (show: boolean) => void;
     collapsed?: boolean;
     t: any;
 }
@@ -36,7 +37,11 @@ class CollapsibleComponentSearch extends React.Component<ICollapsibleComponentSe
     }
 
     private toggleCollapsed = () => {
+        const {onToggleCollapsed} = this.props;
         const show = !this.state.show;
+        if (onToggleCollapsed) {
+            onToggleCollapsed(show);
+        }
         this.setState({ show });
     }
 

src/ui/layout/ContentLayout.tsx

@@ -22,11 +22,12 @@ interface IContentLayoutProps extends React.Props<any> {
   children?: any;
   left?: any;
   right?: any;
+  rightAlwaysCollapsible?: boolean;
   className?: string;
   customHeaderHeight?: boolean;
 }
 
-const ContentLayout = ({classes, children = null, left = null, right = null, customHeaderHeight = false, className = ''}: IContentLayoutProps) => {
+const ContentLayout = ({classes, children = null, left = null, right = null, rightAlwaysCollapsible = false, customHeaderHeight = false, className = ''}: IContentLayoutProps) => {
   return (
     <div className={ className }>
       <div className={ classes.root }>
@@ -36,7 +37,7 @@ const ContentLayout = ({classes, children = null, left = null, right = null, cus
             { children }
           </main>
         ) }
-        { right && (<SidebarWrapper sidebarContent={ right } customHeight={ customHeaderHeight } right/>) }
+        { right && (<SidebarWrapper sidebarContent={ right } customHeight={ customHeaderHeight } right alwaysCollapsible={ rightAlwaysCollapsible }/>) }
       </div>
     </div>
   );

src/ui/layout/sidebar/SidebarWrapper.tsx

@@ -18,6 +18,7 @@ interface ISidebarProps extends React.ClassAttributes<any> {
     width: Breakpoint;
     customHeight?: boolean;
     right?: boolean;
+    alwaysCollapsible?: boolean;
 }
 
 const mobile = ['sm', 'xs'] as Breakpoint[];
@@ -45,12 +46,17 @@ const styles = (theme) => ({
         [theme.breakpoints.down('sm')]: {
           maxWidth: '90%',
           position: 'fixed' as 'fixed',
-          zIndex: 15,
+          zIndex: 1250,
         },
         [theme.breakpoints.down('xs')]: {
           maxWidth: '100%',
         }
     },
+    drawerAlwaysCollapsible: {
+      maxWidth: '90%',
+      position: 'fixed' as 'fixed',
+      zIndex: 1250,
+    },
     drawerHeightV2: {
       top: '83px',
       height: 'calc(100vh - 83px)',
@@ -112,6 +118,9 @@ const styles = (theme) => ({
           minHeight: 'calc(100% - 3rem)',
         },
     },
+    sidebarContentsAlwaysCollapsible: {
+        minHeight: 'calc(100% - 3rem)',
+    },
     sidebarContentsCollapsed: {
       minHeight: 'calc(100% - 52px)',
       whiteSpace: 'nowrap' as 'nowrap',
@@ -152,6 +161,12 @@ const styles = (theme) => ({
             display: 'block' as 'block',
         },
     },
+    collapseButtonAlwaysCollapsible:{
+      display: 'block' as 'block',
+      '& > span': {
+          fontSize: '1.5rem',
+      },
+    },
     buttonCollapsed: {
         top: '100%',
         transition: theme.transitions.create('width', {
@@ -192,13 +207,14 @@ class SidebarWrapper extends React.Component<ISidebarProps, any> {
     }
 
     public render() {
-        const { sidebarContent, classes, isOpen, width, customHeight, right = false } = this.props;
-        const isMobile = mobile.indexOf(width) !== -1;