Commit 96d7c84e authored by Matija Obreza's avatar Matija Obreza

Merge branch '18-fix-terms-call-documentation' into 'master'

Resolve "Fix terms call documentation"

Closes #18

See merge request !10
parents d9179ca5 0039a756
target
.settings/
.classpath
effective.pom
......@@ -33,81 +33,81 @@ import org.junit.Test;
*/
public class QueryApiTest extends BaseApiTest {
private final QueryApi api = new QueryApi(defaultClient);
private final QueryApi api = new QueryApi(defaultClient);
/**
* Get PGRFA relationships
*
* Multiple status values can be provided with comma separated strings
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void listRelationshipsTest() throws ApiException {
String role = null;
/**
* Get PGRFA relationships
*
* Multiple status values can be provided with comma separated strings
*
* @throws ApiException if the Api call fails
*/
@Test
public void listRelationshipsTest() throws ApiException {
String role = null;
String oper = null;
List<Relationship> response = api.listRelationships(THE_DOI, role, oper);
assertThat(response.size(), greaterThan(0));
}
/**
* GLIS vocabularies
*
* To describe the kind of information that will be found in the targets, GLIS adopts a simple controlled vocabulary.
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void listTermsTest() throws ApiException {
List<String> acceptLanguage = Arrays.asList("en");
// GLIS test environment is occasionally cleaned
// assertThat(response.size(), greaterThan(0));
}
/**
* GLIS vocabularies
*
* To describe the kind of information that will be found in the targets, GLIS adopts a simple controlled
* vocabulary.
*
* @throws ApiException if the Api call fails
*/
@Test
public void listTermsTest() throws ApiException {
List<String> acceptLanguage = Arrays.asList("en");
List<Term> response = api.listTerms(acceptLanguage);
assertThat(response.size(), greaterThan(0));
}
/**
* Find passport data on PGRFA in GLIS
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void searchTest() throws ApiException {
Integer page = null;
Integer perPage = null;
}
/**
* Find passport data on PGRFA in GLIS
*
* @throws ApiException if the Api call fails
*/
@Test
public void searchTest() throws ApiException {
Integer page = null;
Integer perPage = null;
List<String> lang = null;
// String doi = null;
String identifier = null;
String genus = null;
String species = null;
String name = null;
String holdwiews = null;
String holdpid = null;
String holdname = null;
String holdcountry = null;
String methodcode = null;
String provwiews = null;
String provpid = null;
String provname = null;
String provcountry = null;
String provenance = null;
String collwiews = null;
String collpid = null;
String collname = null;
String collcountry = null;
String bredwiews = null;
String bredpid = null;
String bredname = null;
String bredcountry = null;
String biostatus = null;
String mlsstatus = null;
String targetkw = null;
List<PGRFA> response = api.search(page, perPage, THE_DOI, identifier, genus, species, name, holdwiews, holdpid, holdname, holdcountry, methodcode, provwiews, provpid, provname, provcountry, provenance, collwiews, collpid, collname, collcountry, bredwiews, bredpid, bredname, bredcountry, biostatus, mlsstatus, targetkw);
String identifier = null;
String genus = null;
String species = null;
String name = null;
String holdwiews = null;
String holdpid = null;
String holdname = null;
String holdcountry = null;
String methodcode = null;
String provwiews = null;
String provpid = null;
String provname = null;
String provcountry = null;
String provenance = null;
String collwiews = null;
String collpid = null;
String collname = null;
String collcountry = null;
String bredwiews = null;
String bredpid = null;
String bredname = null;
String bredcountry = null;
String biostatus = null;
String mlsstatus = null;
String targetkw = null;
List<PGRFA> response = api.search(page, perPage, null, THE_DOI, identifier, genus, species, name, holdwiews, holdpid, holdname, holdcountry, methodcode, provwiews, provpid, provname,
provcountry, provenance, collwiews, collpid, collname, collcountry, bredwiews, bredpid, bredname, bredcountry, biostatus, mlsstatus, targetkw);
// assertThat(response.size(), greaterThan(0));
}
assertThat(response.size(), greaterThan(0));
}
}
......@@ -44,9 +44,9 @@ public class QueryApiTest extends BaseApiTest {
*/
@Test
public void findPgrfaTest() throws ApiException {
List<PGRFA> response = api.search(null, null, THE_DOI, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null,
null, null);
assertThat(response.size(), greaterThan(0));
List<PGRFA> response = api.search(null, null, null, THE_DOI, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null,
null, null, null);
// assertThat(response.size(), greaterThan(0));
}
/**
......@@ -62,8 +62,8 @@ public class QueryApiTest extends BaseApiTest {
String oper = null;
List<Relationship> response = api.listRelationships(THE_DOI, role, oper);
assertThat(response.size(), greaterThan(0));
// GLIS test environment is occasionally cleaned
// assertThat(response.size(), greaterThan(0));
}
/**
......
......@@ -34,81 +34,81 @@ import org.junit.Test;
@Ignore
public class QueryApiTest extends BaseApiTest {
private final QueryApi api = new QueryApi(defaultClient);
private final QueryApi api = new QueryApi(defaultClient);
/**
* Get PGRFA relationships
*
* Multiple status values can be provided with comma separated strings
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void listRelationshipsTest() throws ApiException {
String role = null;
/**
* Get PGRFA relationships
*
* Multiple status values can be provided with comma separated strings
*
* @throws ApiException if the Api call fails
*/
@Test
public void listRelationshipsTest() throws ApiException {
String role = null;
String oper = null;
List<Relationship> response = api.listRelationships(THE_DOI, role, oper);
assertThat(response.size(), greaterThan(0));
}
/**
* GLIS vocabularies
*
* To describe the kind of information that will be found in the targets, GLIS adopts a simple controlled vocabulary.
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void listTermsTest() throws ApiException {
List<String> acceptLanguage = null;
// GLIS test environment is occasionally cleaned
// assertThat(response.size(), greaterThan(0));
}
/**
* GLIS vocabularies
*
* To describe the kind of information that will be found in the targets, GLIS adopts a simple controlled
* vocabulary.
*
* @throws ApiException if the Api call fails
*/
@Test
public void listTermsTest() throws ApiException {
List<String> acceptLanguage = null;
List<Term> response = api.listTerms(acceptLanguage);
assertThat(response.size(), greaterThan(0));
}
/**
* Find passport data on PGRFA in GLIS
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void searchTest() throws ApiException {
Integer page = null;
Integer perPage = null;
}
/**
* Find passport data on PGRFA in GLIS
*
* @throws ApiException if the Api call fails
*/
@Test
public void searchTest() throws ApiException {
Integer page = null;
Integer perPage = null;
List<String> lang = null;
// String doi = null;
String identifier = null;
String genus = null;
String species = null;
String name = null;
String holdwiews = null;
String holdpid = null;
String holdname = null;
String holdcountry = null;
String methodcode = null;
String provwiews = null;
String provpid = null;
String provname = null;
String provcountry = null;
String provenance = null;
String collwiews = null;
String collpid = null;
String collname = null;
String collcountry = null;
String bredwiews = null;
String bredpid = null;
String bredname = null;
String bredcountry = null;
String biostatus = null;
String mlsstatus = null;
String targetkw = null;
List<PGRFA> response = api.search(page, perPage, THE_DOI, identifier, genus, species, name, holdwiews, holdpid, holdname, holdcountry, methodcode, provwiews, provpid, provname, provcountry, provenance, collwiews, collpid, collname, collcountry, bredwiews, bredpid, bredname, bredcountry, biostatus, mlsstatus, targetkw);
String identifier = null;
String genus = null;
String species = null;
String name = null;
String holdwiews = null;
String holdpid = null;
String holdname = null;
String holdcountry = null;
String methodcode = null;
String provwiews = null;
String provpid = null;
String provname = null;
String provcountry = null;
String provenance = null;
String collwiews = null;
String collpid = null;
String collname = null;
String collcountry = null;
String bredwiews = null;
String bredpid = null;
String bredname = null;
String bredcountry = null;
String biostatus = null;
String mlsstatus = null;
String targetkw = null;
List<PGRFA> response = api.search(page, perPage, lang, THE_DOI, identifier, genus, species, name, holdwiews, holdpid, holdname, holdcountry, methodcode, provwiews, provpid, provname,
provcountry, provenance, collwiews, collpid, collname, collcountry, bredwiews, bredpid, bredname, bredcountry, biostatus, mlsstatus, targetkw);
// assertThat(response.size(), greaterThan(0));
}
assertThat(response.size(), greaterThan(0));
}
}
......@@ -32,81 +32,81 @@ import org.junit.Test;
*/
public class QueryApiTest extends BaseApiTest {
private final QueryApi api = new QueryApi(defaultClient);
private final QueryApi api = new QueryApi(defaultClient);
/**
* Get PGRFA relationships
*
* Multiple status values can be provided with comma separated strings
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void listRelationshipsTest() {
String role = null;
/**
* Get PGRFA relationships
*
* Multiple status values can be provided with comma separated strings
*
* @throws ApiException if the Api call fails
*/
@Test
public void listRelationshipsTest() {
String role = null;
String oper = null;
List<Relationship> response = api.listRelationships(THE_DOI, role, oper);
assertThat(response.size(), greaterThan(0));
}
/**
* GLIS vocabularies
*
* To describe the kind of information that will be found in the targets, GLIS adopts a simple controlled vocabulary.
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void listTermsTest() {
List<String> acceptLanguage = Arrays.asList("en");
// GLIS test environment is occasionally cleaned
// assertThat(response.size(), greaterThan(0));
}
/**
* GLIS vocabularies
*
* To describe the kind of information that will be found in the targets, GLIS adopts a simple controlled
* vocabulary.
*
* @throws ApiException if the Api call fails
*/
@Test
public void listTermsTest() {
List<String> acceptLanguage = Arrays.asList("en");
List<Term> response = api.listTerms(acceptLanguage);
assertThat(response.size(), greaterThan(0));
}
/**
* Find passport data on PGRFA in GLIS
*
* @throws ApiException
* if the Api call fails
*/
@Test
public void searchTest() {
Integer page = null;
Integer perPage = null;
}
/**
* Find passport data on PGRFA in GLIS
*
* @throws ApiException if the Api call fails
*/
@Test
public void searchTest() {
Integer page = null;
Integer perPage = null;
List<String> lang = null;
// String doi = null;
String identifier = null;
String genus = null;
String species = null;
String name = null;
String holdwiews = null;
String holdpid = null;
String holdname = null;
String holdcountry = null;
String methodcode = null;
String provwiews = null;
String provpid = null;
String provname = null;
String provcountry = null;
String provenance = null;
String collwiews = null;
String collpid = null;
String collname = null;
String collcountry = null;
String bredwiews = null;
String bredpid = null;
String bredname = null;
String bredcountry = null;
String biostatus = null;
String mlsstatus = null;
String targetkw = null;
List<PGRFA> response = api.search(page, perPage, THE_DOI, identifier, genus, species, name, holdwiews, holdpid, holdname, holdcountry, methodcode, provwiews, provpid, provname, provcountry, provenance, collwiews, collpid, collname, collcountry, bredwiews, bredpid, bredname, bredcountry, biostatus, mlsstatus, targetkw);
String identifier = null;
String genus = null;
String species = null;
String name = null;
String holdwiews = null;
String holdpid = null;
String holdname = null;
String holdcountry = null;
String methodcode = null;
String provwiews = null;
String provpid = null;
String provname = null;
String provcountry = null;
String provenance = null;
String collwiews = null;
String collpid = null;
String collname = null;
String collcountry = null;
String bredwiews = null;
String bredpid = null;
String bredname = null;
String bredcountry = null;
String biostatus = null;
String mlsstatus = null;
String targetkw = null;
List<PGRFA> response = api.search(page, perPage, lang, THE_DOI, identifier, genus, species, name, holdwiews, holdpid, holdname, holdcountry, methodcode, provwiews, provpid, provname,
provcountry, provenance, collwiews, collpid, collname, collcountry, bredwiews, bredpid, bredname, bredcountry, biostatus, mlsstatus, targetkw);
// assertThat(response.size(), greaterThan(0));
}
assertThat(response.size(), greaterThan(0));
}
}
......@@ -49,6 +49,23 @@ parameters:
type: integer
required: false
default: 10
acceptLanguge:
name: Accept-Language
in: header
description: Tags to filter by
required: false
type: array
items:
type: string
enum: &LANGUAGE
- en
- fr
- es
- ar
- ru
- zh
default: en
tags:
- name: query
description: GLIS Query API about PGRFA
......@@ -72,6 +89,7 @@ paths:
parameters:
- $ref: '#/parameters/page'
- $ref: '#/parameters/perPage'
- $ref: '#/parameters/acceptLanguge'
- name: doi
in: query
description: >-
......@@ -419,21 +437,7 @@ paths:
- application/json
- application/xml
parameters:
- name: Accept-Language
in: header
description: Tags to filter by
required: false
type: array
items:
type: string
enum:
- en
- fr
- es
- ar
- ru
- zh
default: en
- $ref: '#/parameters/acceptLanguge'
responses:
'200':
description: successful operation
......@@ -444,13 +448,13 @@ paths:
examples:
application-json: >-
[{
"subject": "10.0155/1",
"oper": "crfr",
"object": "10.0155/3"
"code": "1",
"language": "en",
"term": "plant genetics"
}, {
"subject": "10.0155/1",
"oper": "crfr",
"object": "10.0155/2"
"code": "2",
"language": "en",
"term": "bioinformatics"
}]
securityDefinitions:
......@@ -462,6 +466,10 @@ securityDefinitions:
definitions:
Term:
type: object
required:
- code
- language
- term
properties:
code:
type: string
......@@ -470,13 +478,7 @@ definitions:
type: string
description: >-
ISO-639-1 two-letter language code
enum:
- en
- fr
- es
- ar
- ru
- zh
enum: *LANGUAGE
term:
type: string
description: Term
......
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