* release-2022.9: (34 commits)
  [maven-release-plugin] prepare release v2022.9
  Inventory: Alert parent inventory is SYSTEM inventory on startup
  Last viability: Updated ApplicationStartup#generateSeedInventoryExtra to first delete all extras, then find only one inventoryViability per inventory
  Last viability: Updated triggers and tests to always process seedExtra.lastViability
  Inventory: Process extra for last viability updates
  Startup: Generate inventory extra by last viability
  Liquibase: Add mediaTypeCode and extraType to Inventory extra
  Inventory: SeedInventoryExtra with lastViabilityResult
  Inventory: Included InventoryExtra in list()
  CustomTypeIdResolver: TypeIdResolver for subtypes by _class
  Inventory: TissueCultureExtra, SeedInventoryExtra
  Liquibase: Inventory extra data entity table
  Inventory: extra data entity
  Include Geography in Method list endpoints
  Email: Updated template
  AppResource: Resize app_resource description and display_member to text
  Email: GGCE email template
  Java: Updated deprecation warnings
  ES: ElasticQueryBuilderTest must wait for ES to settle before adding the 11 species
  GenesysController: Update request provider endpoint
  ...

# Conflicts:
#	server/src/main/java/org/gringlobal/service/impl/ElasticsearchServiceImpl.java
#	server/src/main/java/org/gringlobal/service/impl/InventoryServiceImpl.java
#	server/src/test/java/org/gringlobal/test/util/TestCodeValues.java

Resolve "parentInventory cannot be a SYSTEM inventory"

Closes #372

See merge request grin-global/grin-global-server!486

Resolve "Extending Inventory with extra data"

Closes #371

See merge request grin-global/grin-global-server!483

Matija Obreza authored 2 years ago and Artem Hrybeniuk committed 2 years ago

Last viability: Updated ApplicationStartup#generateSeedInventoryExtra to first delete all extras, then find only one inventoryViability per inventory

Include Geography in Method list endpoints

See merge request grin-global/grin-global-server!485

GenesysController: Update request provider endpoint

See merge request grin-global/grin-global-server!484

Resolve "GGCE Email template"

Closes #336

See merge request grin-global/grin-global-server!447

- waitForCount needs matching _WRITE and _READ indexes
- Realiasing updated: delete alias from "prefix_classname + *"

* release-2022.8:
  Merge branch '370-bug-reindex-all-es-does-not-reindex-all' into 'main'
  Merge branch '367-startup-warn-about-users-without-site' into 'main'

* commit 'c5f2265a':
  Merge branch 'soap-fixes' into 'main'
  Merge branch 'genesys-requests-not-draft' into 'main'
  Merge branch 'order-request-permissions' into 'main'
  pom: bouncycastle 1.70

* commit '56c49890': (49 commits)
  [maven-release-plugin] prepare release v2022.8
  Programmable liquibase: Keep author constant for ChangeSet uniqueness
  Branding: GGCE
  AccessionPedigree: lazyload for male and female accession
  Model: Added utility methods for working inside @Transactional scope
  TaxonomySpecies: filter directly by genus name
  AccessionPedigree: Accession has only one single AccessionPedigree record
  Jasper: Search for ResourceBundle by ResourceRepository.
  Jasper: report localization
  AccessionSource: Add new fields to filter
  Permission: Add checks for GenesysController and InventoryViabilityAction
  GGCE Sec: Declare GenesysRequests and GenesysUpload actions
  Jasper: Updates for CODEVALUE(group_name, value, lang) function
  Jasper: CodeValue translation custom function
  CI: Use runner docker to build image
  BUG: Calling ES refresh as part of clearing ES caches seems to affect deleteAll
  BUG: Fixed bug with Spring context in DataviewServiceImpl
  junit: Moved tests
  junit: Security context @ggceSec evaluates to wrong bean
  DataviewServiceImpl: Get JPA repositories from context on execution
  ...

# Conflicts:
#	server/src/main/resources/liquibase/liquibase-changeLog.yml

* release-2022.7:
  Merge branch '357-can-not-set-password' into 'main'

File repository streaming

See merge request grin-global/grin-global-server!482

Resolve "Bug: Reindex All ES does not reindex all?"

Closes #370

See merge request grin-global/grin-global-server!481

(cherry picked from commit 56687cb9)

Resolve "Startup: Warn about users without site"

Closes #367

See merge request grin-global/grin-global-server!479

(cherry picked from commit d6203ca2)

Resolve "Bug: Reindex All ES does not reindex all?"

Closes #370

See merge request grin-global/grin-global-server!481

ES: Acquire elasticsearchReindexLock when reindexing by filter, but don't set databaseReindexRunning

Artem Hrybeniuk authored 2 years ago and Matija Obreza committed 2 years ago

SOAP Fixes

See merge request grin-global/grin-global-server!478

(cherry picked from commit 879fb210)